Ruegeria pomeroyi: SPO3376
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Entry
SPO3376 CDS
T00215
Name
(GenBank) ribosomal RNA small subunit methyltransferase B, putative
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sil03009
]
SPO3376
Enzymes [BR:
sil01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
SPO3376
Ribosome biogenesis [BR:
sil03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SPO3376
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
Methyltransf_31
Methyltransf_11
MTS
FtsJ
Methyltransf_37
Methyltransf_12
Methyltransf_15
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AAV96603
UniProt:
Q5LN36
LinkDB
All DBs
Position
complement(3578934..3580205)
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AA seq
423 aa
AA seq
DB search
MADSATQARQSAIDLLDQILGEGRLLSECLGAGALDRLPPEERARAQRLTLDTLRGLERA
DRLLKPHLQKAPPLSVRNALRLGTVELAHGEAAHGVVHSMVEIVGRSRRHGRLKGLVNAV
LRKVAADAPSAWGRLRVPRLPRWLRDPLVQAWGAPAVAAMEAAHFVGAPLDLTLKSGASA
PGGEVLPTGSVRLHDAGQVSALPGFAAGDWWVQDAAAALPVQLLDPQPGESVLDLCAAPG
GKTMQLAAAGARVTALDISEGRMARVRENLARTGLSAETVVGDALEQGGQYDAVLLDAPC
SATGTIRRHPDLPLAKDGSEFGALIELQAQMIAHAWTLVRPGGRMVFCTCSLLPDEGEVQ
VEEALTLYPDMSTDRAALGLPGIDPAWITEEGGLRLRPDYWSERGGMDGFYMAVLRKAAD
GPE
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagcgcgacccaggcgcggcaaagcgcgatcgatctgctcgaccagattctg
ggcgaggggcggctgttgtccgaatgtctcggcgccggggcgctggaccggttaccgccc
gaggagcgcgcgcgcgcccagcggctgacacttgataccctgcgcgggctggagcgcgcc
gaccggctgctgaaaccgcatctgcaaaaggcgccgccgctgagtgtgcgcaacgcgctg
cggctggggacggtcgaactggcccatggcgaagctgcccatggggtggtgcattccatg
gtcgaaatcgtcggtcggtcgcgccggcacgggcggctcaaggggctggtcaacgcagtg
ctgcgcaaggtggccgctgacgcgccctccgcgtggggccgcctgcgggtgccgcgcctg
ccgcgctggctgcgcgatccgctggttcaggcctggggcgcgcctgccgtcgcggcgatg
gaggcagcgcatttcgtgggcgcgccgcttgatctgacgctgaaatccggggcgtccgcg
ccgggcggagaggtgctgccgaccggttcggtgcgcctgcatgatgcggggcaggtctcg
gccctgccgggctttgccgccggcgactggtgggtgcaggatgccgccgccgcgctgccg
gtacagctgctcgatccgcaaccgggcgagagcgtgctggacttgtgcgccgcgccgggg
ggcaagaccatgcaactggccgcagcaggggcgcgggtcaccgcgctcgatatctccgaa
gggcggatggcccgcgtgcgcgagaaccttgcccgcaccgggctgagcgctgaaacagtg
gtgggcgacgcattggaacagggcggccaatatgacgcggtgctgctggacgcgccctgt
tcggccaccggcaccatccggcgtcaccccgacctgccgctggccaaggacggttccgaa
ttcggcgcgctgatcgagttgcaggcacagatgatcgcccatgcctggaccctggtcagg
ccgggcgggcgcatggtgttctgcacatgctcgctgttgcccgacgagggcgaggtgcag
gttgaagaggcgctgacgctttatcccgacatgtccaccgaccgcgccgcgctgggcctg
cccggcatcgatccggcctggatcaccgaagagggtggcctgcgcctgcgccccgattac
tggtccgaacggggcggtatggacgggttttacatggcggttctgcgcaaggcggccgac
ggccccgaataa
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