Ruegeria pomeroyi: SPO3434
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Entry
SPO3434 CDS
T00215
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil03030
DNA replication
sil03430
Mismatch repair
sil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPO3434
03430 Mismatch repair
SPO3434
03440 Homologous recombination
SPO3434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sil03032
]
SPO3434
03400 DNA repair and recombination proteins [BR:
sil03400
]
SPO3434
Enzymes [BR:
sil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPO3434
DNA replication proteins [BR:
sil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPO3434
DNA repair and recombination proteins [BR:
sil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPO3434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AAV96660
UniProt:
Q5LMX8
LinkDB
All DBs
Position
3637587..3638615
Genome browser
AA seq
342 aa
AA seq
DB search
MKLSPREADGYFARPDAGKTGILIHGADAMRIALKRQQIIAALLGPGGEEEMRLTRMPGA
ELRKDAAQLLDAVKAVGFFPGPRVVFVEDCPETSAPAVLTALEDWQPGDAQIVVTAGQLK
PSSKIRKAFETHPNAYAAGIYDDPPSRAEIERMLSAAGIRDVPPEPMTVLSDLARDLGPG
DFAQTMEKLALYKLGDTAPLVLEDIAACAPRSTEAALDDVLNVVAEGKEGEIGPLIRRLQ
AQGTTPVSLCIGATRHFRTLYTCASAPGGPSQGIGALRPPVFGPRRDRILNQAQRWGARR
LEAALTVLTDTDLALRSAGQSAPQMALVERAMIRLAWLSRSR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtccccgcgcgaggcggatggctatttcgcccgtcccgacgcgggcaagacc
ggtatcctgatccacggggccgatgccatgcgcatcgcgctgaaacgccagcagatcatc
gcggcacttcttggcccgggtggcgaggaagagatgcgcctgacccggatgcccggggcc
gagttgcgcaaggacgcggcccagcttctggatgcggtcaaggcggtgggcttctttccc
ggcccgcgcgtggtctttgtcgaggattgccccgaaacctcggcccctgcggtgctgacg
gcgctggaggactggcagccgggcgatgcccagatcgtggtgaccgccggccagttgaaa
cccagttccaagatccgcaaggcgttcgaaacccatcccaacgcctatgccgccggtatt
tatgacgacccgccctcgcgggccgagatcgagcggatgctgtccgccgccggaatccgc
gacgttccgcccgagccgatgacggtcctgtccgatctggcgcgcgatctggggccggga
gatttcgcgcagacgatggaaaagttggcgctttacaagctgggggataccgccccgctg
gtgcttgaggatatcgccgcctgcgccccccgctcgaccgaggcagcgttggacgacgtg
ttgaacgttgtggccgagggcaaggagggcgagatcgggccgctgatccgccggcttcag
gcccagggcaccacaccggtcagcctatgcatcggggcgacccggcatttccgtacgctc
tatacctgtgcctcggcccccggcgggccgtcacagggcatcggcgcgctgcgcccacct
gtctttggcccccgccgcgaccgcattctgaaccaggcgcagcgttggggtgcgaggcgg
ctcgaggcggcgctgacggtgctgaccgataccgacctcgccctgcgctcggcggggcaa
tcggcgccgcagatggcattggtcgagcgggcgatgatccgtctggcgtggctatcccgg
tcacggtaa
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