Ruegeria pomeroyi: SPO3473
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Entry
SPO3473 CDS
T00215
Name
(GenBank) polyamine ABC trasnporter, periplasmic polyamine-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPO3473
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO3473
Transporters [BR:
sil02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SPO3473
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AAV96699
UniProt:
Q5LMT9
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All DBs
Position
3677391..3678464
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AA seq
357 aa
AA seq
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MKLKTALLATALTSAAFAVSAQEVTVMSWGGAYTKSQVEAYHKPFTAETGIKVNSVDADN
PATPIKAQVEAGNVSIDVADVEFSDAVRLCDEGLLEEIDPAILSAAPDGTAATDDFIDGA
LQDCAVANIVWSTSVAYNTANVSMAPSSIADFFDTGKIPGKRGLRKSAKATLEMALMGDG
VPANEVYDVLDTDEGVDRAFAVLDRIKSDIVWWEAGAQPPQLLADGEVVMSTAYNGRIFN
AAVAEGQPFEIMWDGQILDFDLFVVPKGAPNKDAAMQFIAFSTSTQALADQAKWISYGPA
RKSSGALVGLYQDGKTEMAPHMPTSEAALKNALVNNFEFWVDKDAELNERFNAWLAN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaagacagctttgctggcaacggcgctgacctcggcagcctttgccgtctcc
gcgcaggaagtcaccgtgatgtcctggggcggcgcctataccaagagccaggtcgaagcc
tatcacaaacccttcaccgccgagaccggcatcaaggtgaactcggtcgacgccgacaac
ccggccaccccgatcaaggcacaggtcgaagccggcaacgtttcgattgacgttgccgac
gtcgaattctcggacgccgtgcgcctgtgcgacgaaggtctgctggaagagatcgatccc
gcgatcctgtccgccgcccccgatggcaccgccgccacggatgacttcatcgacggagca
ctgcaggattgcgccgtggccaacatcgtctggtccacctcggttgcctacaacaccgca
aacgtgtcgatggccccgagctcgatcgccgatttcttcgacaccggcaagatcccgggc
aagcgcggcctgcgcaaatccgccaaggcaacgctggaaatggctctgatgggcgacggc
gttcctgcaaacgaagtctatgacgtgctcgacaccgacgaaggcgtcgaccgcgcattc
gccgtgctggaccggatcaagagcgatatcgtctggtgggaagctggcgctcagccgccg
cagctgctggccgatggcgaagtggtgatgtcgaccgcctataacggccgtatcttcaac
gccgccgtggccgaaggtcagcccttcgaaatcatgtgggacggccagatcctcgacttc
gacctgttcgtggtccccaaaggcgcaccgaacaaggacgccgccatgcagttcatcgcc
ttctcgaccagcacccaggcgctggcggatcaggccaagtggatcagctatggcccggca
cgcaagtcctcgggcgcactggtcggcctctaccaggacggcaagaccgagatggcgccc
catatgcccacctcggaagcagccctgaagaacgcgctggtcaacaacttcgagttctgg
gtcgacaaggacgccgaactgaacgagcgctttaacgcttggctggcgaactga
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