Ruegeria pomeroyi: SPO3478
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Entry
SPO3478 CDS
T00215
Symbol
glcD
Name
(GenBank) glycolate oxidase, GlcD subunit
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00630
Glyoxylate and dicarboxylate metabolism
sil01100
Metabolic pathways
sil01110
Biosynthesis of secondary metabolites
sil01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SPO3478 (glcD)
Enzymes [BR:
sil01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
SPO3478 (glcD)
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GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
DUF6889
Motif
Other DBs
NCBI-ProteinID:
AAV96704
UniProt:
Q5LMT4
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Position
3682017..3683465
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AA seq
482 aa
AA seq
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MDMPTPNPTVLAKKPRLVQRLRQVLPDDGVIDDLSETRAYECDALTAYRCPPLLAVLPAS
TQEVSDVLRICHEEGVPVVPRGSGTSLAGGALPTADSVILGVARMNEVLETDYDNRVIRV
QSGRTNLSVTGAVEAEDFFYAPDPSSQLACAIAGNIAMNSGGAHCLKYGVTTNNLLGVTM
VLMDGTVVEIGGAHLDAGGLDLLGVICGSEGQLGVVTEATLRILRKPEGARPVLMAFDSN
EVAGACVSDIIKAGVLPVAIEFMDRLCIEACEAFAKAGYPQCEALLIVEVEGSEAEIDDQ
LTRIIEIARRHNPLELRESQSAEESARIWLGRKSAFGAMGQINDYMCLDGTIPVSALPMV
LRRIGELSQEYGLKVGNVFHAGDGNMHPLILFDANKPGDLEKCEAFGADILKLCVDAGGC
LTGEHGVGIEKRDLMLHQYAAEDLEAQMAVKDVFDPHWLLNPAKVFPLSVSESRRAVQVA
AE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcccaccccgaacccgaccgtcctggccaagaagccacgccttgtgcagcgt
ctgcggcaggtcctgcccgatgacggggtgatcgacgacctctccgagacgcgcgcttat
gaatgcgacgcgctgaccgcctatcgctgcccgccgctgctggcggttctgcccgcctcg
acacaggaagtctcggacgtgctgcgcatctgccatgaagagggcgtgccggtggtgccg
cgcggttcgggcacctcgctggcggggggcgcgctgcccaccgccgacagcgtgatcctg
ggcgtggcgcggatgaacgaggtgctggagacggactatgacaaccgcgtcatccgggtg
caatcgggccgtaccaatctgagcgtcaccggcgcggtcgaggccgaggatttcttttac
gcccctgacccctcgtcgcagctggcctgcgccatcgcgggcaatatcgcgatgaactcg
ggcggggcgcattgcctgaaatacggggtgaccaccaacaacctgctgggtgtcaccatg
gtgctgatggacggcaccgtggtcgagatcggcggcgcgcatctggatgcgggcgggctg
gacctgctgggcgtgatctgtggcagtgaggggcagttgggcgtggtcaccgaggccaca
ctgcgcatcctgcgcaagcccgaaggcgcgcgcccggtattgatggcgttcgacagcaac
gaggtcgccggtgcctgtgtcagcgacatcatcaaggccggcgttctgccggtggcgatc
gagttcatggaccggctctgtatcgaggcctgcgaagcctttgccaaggcgggctatccg
caatgcgaggcgctgctgattgtcgaggtcgaggggtccgaggccgaaatcgacgaccag
ctgacccgcatcatcgagatcgcccggcgccacaacccgctggaactgcgcgaaagccag
tcggccgaggaaagcgcccgcatctggctgggccgcaaatcggcctttggcgccatgggg
cagatcaacgactatatgtgccttgacggcaccatccccgtttccgccctgccgatggtg
ctgcgccggattggcgaactcagccaggaatatgggctgaaggtgggcaacgtgtttcac
gcgggcgatggcaacatgcacccgctgatcctgttcgatgccaacaagcccggtgacctg
gagaaatgcgaggcattcggcgctgacatcctgaaactctgcgtcgatgcgggcggttgc
ctgaccggcgaacacggggtggggatcgagaaacgcgacctgatgctgcaccaatacgcg
gcagaggatctggaggcgcagatggcggtcaaggacgtgttcgacccgcactggctgttg
aaccccgccaaggtgtttccgctgtcggtgtccgagagccgacgcgcggtacaggttgcg
gcagagtag
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