Ruegeria pomeroyi: SPO3631
Help
Entry
SPO3631 CDS
T00215
Name
(GenBank) OmpA domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO3631
Transporters [BR:
sil02000
]
Other transporters
Pores ion channels [TC:
1
]
SPO3631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF748
Motif
Other DBs
NCBI-ProteinID:
AAV96854
UniProt:
Q5LMD3
LinkDB
All DBs
Position
3832991..3834904
Genome browser
AA seq
637 aa
AA seq
DB search
MRLPLTLVVALTFVLAALICGVAASFAVTAVEENSEIAVRRGLDRAGHNWAEVQANGLQV
IVTGMAPDEATRFNALSVVGGEVDASRVIDLMQVRPSAGLAAPKFSIEILRNDSGVSIIG
LVPASMNRQALLTSLKRLADGQQVADLLETASYPVPEGWQDAMDYAVVALGMLPRSKISV
SAGRVTVRAISDSGADKKRLEQALNRAAPPSLRIGLDIAAPRPVLTPFTLRFLIDQDGAR
FDACAADTEAARDRILSAARAAGMQESASCTIGMGVPSPRWAKAAELSLAALAELGQGTV
TIADADITLVVAQGTDPALFDRVVGELETGLPDVFALHAVLPEPETKQTAGPPEFTATLS
PEGLVQLRGRLGSDHAREMVDSYAKAAFGSTAVYTAARIVPDLPADWPVRVLAGLEALAT
LRNGALVVSPDRVMLRGTSHVEEASAEIARLLADKLGENQSFDLEIAYEAPPEPAETSLD
ADRCEALLAEVQANDKIAFEPGSATIAASASGTMDRIADLLQSCGPIRLEIQGHTDSQGR
EEMNQQLSQARAQSVLNELRARRVLTASYAAVGYGESQPIADNGTEDGREANRRIEFRLI
RPEQADEHTTALEQVEAEQSGDADTEQSTTGTTGEDQ
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttcctctgaccctcgtggtcgcgctgacctttgttctggcagcgctgatttgc
ggtgtggccgccagtttcgccgtgaccgctgtcgaggagaactcggaaatcgccgtgcgg
cgcgggttggaccgagctggccataactgggccgaagtccaggccaacggcttgcaggtg
atcgtcaccggtatggccccggacgaggcgacgcggttcaatgcgctgtcggtcgtgggg
ggagaggtcgatgcctcgcgcgttatcgacctgatgcaggtgcggccctcggcgggactg
gccgctccgaaattctcgatcgagattctgcgtaacgattccggcgtgtcgatcatcggc
ctggttcccgcctcgatgaaccggcaggccctgctgacctcgctgaaacggctggccgac
gggcagcaggtggccgatttgctggaaaccgccagctatccggtccccgaaggctggcag
gatgcgatggattatgcggtggtcgcgctgggcatgctgccgcgctcgaagatctcggtc
agcgccgggcgggtgacggtgcgcgccatctcggacagcggcgccgacaagaagcggttg
gagcaggcgctgaaccgcgccgcaccaccctcgctgcggatcggtcttgatatcgcggca
ccgcgcccggtgttgacgccctttaccctgcgcttcctgatcgaccaggacggcgcccgt
ttcgacgcctgcgccgccgataccgaggccgcgcgcgaccgcatcctgagtgccgcgcgc
gccgccgggatgcaggaaagcgcctcttgcaccatcggcatgggggtgccctcgccccgc
tgggccaaggccgccgagctgagccttgccgccctggccgagctgggtcagggcaccgtg
accattgccgatgccgatatcactctggtggtggcgcagggcaccgacccggccctgttc
gaccgcgtggtcggagagctggagaccggcctgcccgatgtgtttgccctgcatgcagtc
ttgcccgagcccgaaaccaagcagaccgccggcccgcccgaattcaccgccacgctcagc
cccgaggggctggtgcagctgcgcggacggcttggcagcgatcacgcacgcgagatggtg
gacagctatgccaaggccgcctttggctcgaccgcggtctataccgccgcccggatcgta
cccgacctgccggcggattggcctgttcgggtgctggccgggctcgaggcgctggcgacg
ctcagaaacggcgcactggtggtcagccccgaccgggtgatgctgcgcggtaccagccat
gtggaagaggccagcgccgagatcgcccgcctgctggccgacaagctgggcgaaaaccag
agcttcgatctggaaatagcctatgaggcgccgcccgaacccgcagaaaccagcctggac
gccgaccggtgcgaggcgctgctggccgaggtgcaggcaaatgacaagatcgcctttgaa
cccggctctgccaccattgcggccagtgcctcgggcacgatggaccggatcgcggacctg
ttgcagagctgcggaccgatccggctggagatccagggtcacaccgacagtcagggccgc
gaagagatgaaccagcagcttagccaggcgcgcgcgcagtcggttctgaacgagctgcgc
gcgcgccgggtgctgaccgcgagctatgccgccgtcggttatggcgaaagccaaccgatc
gccgataatggcaccgaggatggccgcgaagccaaccgccgcatcgaattccgtctgatc
cgtccggaacaggcagacgaacacaccacggcgctggaacaggtcgaggcagagcaatcc
ggcgatgcggataccgagcagagcaccaccgggaccaccggggaggatcagtaa
DBGET
integrated database retrieval system
