Ruegeria pomeroyi: SPO3673
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Entry
SPO3673 CDS
T00215
Name
(GenBank) type I secretion target repeat protein
Organism
sil
Ruegeria pomeroyi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
PT-HINT
Motif
Other DBs
NCBI-ProteinID:
AAV96895
UniProt:
Q5LM90
LinkDB
All DBs
Position
complement(3876045..3882539)
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AA seq
2164 aa
AA seq
DB search
MANEFNLTKYRDIDNFDDLVEYHRGLRASNDYLNSNSFADITIDLAINIGRILTGREPLL
DPTPPHHSQSIEFAQGVSNTAIAAGIATLGAKAGAFGTISWGAEAVVAAINSGAGDHATA
YANSLDVLDAAQKGHVSLDQEAYDFLAKELAKATFPDKVSIVEDKLEIAAEKLGLNSTTL
SDAINNCFVAGTNIYMWPSDPSLQPNEYGAYDTETVHKKVWKKRIENISSGDIVVSYDTE
GNLKPGKVKQTFQNHTTDLIRLRRGDEYDDLFTTPGHLFLGESGNFFRIGDQLQFVGEEV
SLVDFHGNIVTAKRSKVHPGEIENSPPKDDSITQVGWRTYNFEVEDFHTYIADGNRVHND
SFYSVKDVPANRTVSEVIGTLGKVIGYRDVLDGNNNPVNAGSVDEEGNTVSSPGAGGHVG
HDGSPSAWGGGEQPVILDLNNDGVEISFDQKISFDWDQDGYRERTSWVSADDGFLVIDLN
ADGSRGSGDGQIDQARELAFTLWGNEDDTDLQGLRRAFDDNNDGVLNTSDSVWNELRIWQ
DLDQDGETDNGELRSLADWGITQINLGYDDGSDYDHTDDDITVYGNTLHGLASYTRNGEA
IEGGVGDVSLAASEQGWRRVETSSGFTVELENGETYQYQKLDETGPDDIDLVSAWLDGAE
GNDNANLLDASGHTRSVSVNGGAGADTVLGGQADDILIGGEGSDSLDGGAGNDLVIFDAD
DVAIRGGDGFDSALYSGTSSITFDLAANGFERASGGDASDTLIAEYTSTSVWLYGRAGQD
LLRGGGADDLLSGGEGNDTLYAQVGDDLVIGGIGQDQLHGEDGDDYLLGGDGHDNLDGGN
GDDQLFGGDNEDTLWGRDGDDTLYGDAANDVLRGEAGDDVLFGGDHNDRLMGGDGDDFLN
GGEGRDTIYGGAGDDVAYGGAEYDLFFDGDGDDVYKGGGGNDIFELQTHSGQNVVQGGLG
TDTLRLNGHRDMWQWESVHKTSQVQTGTVEGGPDGGQPIYSTAHQGKGQYIFYSGDAVVH
VQDVEQVVFLGNSGKTFWSHKALEDEEAFSLNYVASYDDLIANDEVDNTSSNWTIGRDHW
VNYGQAENREVTFNPLQYLAANPSVYQLHGFDLTAATRHYIDTGHDAGLSRGDFDAEQYL
KNYSDMRSQFGADLSAATRHYIEHGRAAGRTDDAVSGAMTDAEFAAWLTSLADQDEVIYL
VEADAGEDNEATFYFADRDDLEIADPNAVIFGHAIVANNTSAGSGNDTIYADSTSTGHWL
YLNQQESTSGSEDTLRGGDGADVIYAGADDDSVFGDSGSDSIAGQDGDDILRGQDGSDSI
TGGDGQDTLYGHDGADVLVGGLGNDYVRGGNGADRQWGGEGDDSVYGDAGADTLFGENGN
DTLKGHDGSDVLLGGEGNDTLDGMNGSDRLYGEAGNDSLVGDLGDDRLEGNVGDDTLSGG
SGNDYLDGGEGDDSLSGGNAQDALFGGEGADTLDGGGDNDILYGNDGTDSLDGGSANDAL
HGGAGADTLNGGDGIDAASYAGSSEAVYVRLDGTNASNFTGDAVGDVFSGIENLFGSEHD
DQLYGDASHNVLWGADGNDTLNGLAGNDDLMGGDGADRLIGDSGIDRLSGESGADSLYGG
ADRDFLFGGADDDHLEGGAGNDSLSGGDGNDSIYVGADDANVSGNDTADGGAGDDLIIGS
NGYDHLKGGDGNDTLNGGDDLATAERDTLEGGTGNDSITSGQVVIPDADRQIYGDYMYGG
GGDDTITGGKGDDVIYTGGPTDNLVGFDHASGGDGDDLIHGSNGKDLLFGDAGNDTLTGG
NDGITADADTLDGGDGNDSLTSGQTLAPEAGREGLGDHLFGQAGDDTLTGGAANDVLKGG
SGNDELWGGDGNDSIYSGAAEANQSGNDTADGGAGDDLLVGSNGYDHLKGGDGNDTLNGG
DDLATAERDTLEGGAGNDSITSGQVETPDADRQAFGDRMYGGGGDDTITGGKGDDVIYTS
GPTENLVGFDHASGGDGDDQIFGSNGKDLLHGDAGNDTLTGGDDGITADADTLYGGDGND
HLTSGQTDAPEAGREALGDHFYGEAGNDTLTGGKANDYLEGGTGADSFVFLSDFGQDTIA
DFSTSQSGETIDLSGVSQITSFSDLTTNHLTQSGSDALISDGAGNTITLTGINMADLTAD
DFLF
NT seq
6495 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgagtttaatcttactaaatacagggacattgataattttgatgatctagtc
gagtaccataggggattgcgtgctagcaatgactatctaaactctaacagctttgcggac
ataacaattgacttagctataaacattgggcgcatcctaacaggccgtgaaccattgctc
gacccaacccccccccatcacagtcaatcgattgagtttgctcagggagtatctaatact
gctatagctgctggaatagcaacgttgggcgcaaaagcaggagcgtttgggaccatatcc
tggggcgctgaagcggtagtagcagcaatcaactcgggcgctggagaccacgctaccgct
tacgcaaactccctcgacgtgttggacgctgcgcaaaaaggtcacgtgagtcttgatcaa
gaggcttacgactttttggccaaggaattggcaaaggccacctttcccgacaaggtatcg
atagtcgaagacaaactggaaattgcggctgaaaagttggggttgaactcgaccacttta
tccgatgccattaataactgctttgtagcaggcacaaatatatatatgtggcctagtgac
ccttcgctgcagccgaatgaatatggcgcgtatgacacagaaaccgtacacaaaaaagta
tggaaaaagagaattgaaaacatctcttcgggcgacatagtggtgtcctatgacacagag
ggcaacctgaaaccaggaaaagtaaagcagacctttcagaatcatacaacagatttgatt
agactaaggcgtggggacgaatatgatgatctctttacgacgccgggtcacctgttccta
ggtgaatcaggtaactttttccggataggagatcaacttcaatttgtcggagaagaagta
agtttagttgattttcatggaaatattgtcacagcaaaacgatcaaaagtacaccctggt
gaaatcgaaaactcaccccctaaagatgacagcatcacgcaagtaggttggagaacctac
aattttgaagttgaagatttccacacatacattgccgacgggaatcgggttcataacgat
tcattctatagcgttaaagacgtccccgcaaatcgaaccgtatcggaggtaataggaact
ctcggtaaggtaatcgggtaccgcgacgtattggacgggaataacaatccagttaatgca
ggcagcgttgatgaagaagggaatacggtttcgtcaccgggtgcaggagggcatgtgggg
cacgacgggagcccaagtgcctggggcggtggagagcaacccgtcattttggatttgaac
aatgacggcgtggagatcagtttcgaccaaaagatctcatttgactgggaccaggatggg
tatcgtgaacgtaccagttgggtatcagcagatgacggatttcttgtcattgatctgaac
gcggatggatcgcgcggatcaggggatggtcagatcgatcaggcccgagaattggctttt
acgctatggggcaatgaggacgataccgatctacaaggacttcggcgtgcgttcgatgac
aacaatgatggtgttctgaatacttcggacagtgtttggaacgagttgcgaatatggcaa
gatctcgatcaggatggcgagacagacaacggggaactgcgcagcctggctgattggggc
atcacgcagatcaacctgggttatgacgatggttccgactacgatcacactgatgatgac
atcaccgtctatggcaacactctgcacgggttggcgtcctatacccgcaacggggaagct
attgaaggtggtgtgggcgatgtatccttggcagcgtccgaacaaggatggcgacgtgtt
gaaacatcttcaggatttacagttgagctggagaatggcgaaacataccaataccaaaag
ctggacgaaacgggaccagatgacattgatcttgtcagcgcgtggctggatggcgctgaa
ggcaatgataatgcaaacctgctcgatgcttcggggcatacacgtagcgtctcggtaaac
ggcggtgcaggggctgatacagtccttggcggacaagctgatgatattctgattggcggc
gaaggaagcgacagcctagacggcggtgccggaaacgacctcgtaatctttgatgctgac
gacgtagccattaggggtggcgatggttttgacagtgccctctactctggcacgtcaagc
ataacatttgatctagctgcaaatggcttcgagcgagcatctgggggcgatgccagcgat
actttgattgccgaatacacttcaacttccgtttggttgtatggccgtgcaggccaagac
cttcttcgtgggggcggtgcggatgacctcctgtccgggggagaaggcaacgacacactt
tatgctcaagttggcgatgacctagtcattggtgggatcggccaagaccaattgcatggc
gaggatggcgacgattatcttctcggtggcgacggtcacgacaaccttgatgggggcaat
ggcgatgatcagttgtttggcggagacaacgaagacactctttggggacgagatggagat
gacaccctctatggcgatgcagccaacgatgtcttgcgtggcgaggccggggatgatgtt
ctattcggcggagatcataatgaccgcctgatgggcggagatggcgacgacttcctcaac
ggtggcgaaggtcgtgacaccatctatggcggcgcgggtgatgatgtcgcctatggcggt
gctgaatatgatctcttcttcgatggggatggcgacgacgtctacaagggcggtggcggc
aacgatatcttcgagctgcaaacccatagcgggcagaatgtggttcaagggggtctaggg
accgatacgctgcgcctcaacggtcaccgggacatgtggcaatgggagtctgttcacaaa
acaagccaggtccaaaccgggacggttgaaggtggccccgatggcgggcaaccaatttac
tcgacggcccaccagggtaaaggccaatacatcttctactcgggtgatgctgttgtccat
gttcaggatgtcgagcaagtcgttttcctgggaaacagtgggaaaaccttctggtctcat
aaagcacttgaagacgaggaagcctttagcctgaactatgtcgcgtcctatgatgacctg
atcgccaatgacgaagttgacaacacgtcaagcaattggaccattgggcgggaccactgg
gtcaactacggccaagccgagaaccgtgaggtgacgttcaatccccttcagtacctagcg
gcaaatccttcggtgtatcagctccatggttttgatctgacggctgcaacccgtcactac
attgataccggtcatgacgctggtttgagccggggtgactttgacgccgaacaatatctg
aagaactactctgatatgcgttcgcaattcggcgcggacctgtcagcggcaacccgtcat
tacatcgaacatggtcgtgccgcgggtcgcacggacgatgccgtctccggcgcgatgacc
gacgccgagtttgcggcctggttaacctcgctggcggatcaggacgaggttatctatctg
gttgaagcggacgcaggcgaagacaatgaggcaaccttctatttcgcggatcgcgatgat
ctggagatagcagacccaaatgccgtcatttttgggcacgccattgtggcaaacaacact
tcggcaggttcagggaatgacacgatttatgcagacagcaccagcactggccactggctg
tatctgaaccaacaggaaagcacatctggcagcgaagacactctgcgcggtggagatggc
gcggatgtgatctacgcaggagcggatgacgactcggtgtttggcgactccggttccgac
agtatcgcaggccaggacggtgacgacattctgcgcggtcaggatggcagcgacagcatc
acaggaggtgatggccaggatacgctctacggtcacgatggggcggatgtgctggtcggc
ggccttggaaatgactacgtgcgcggcggcaatggtgccgaccgtcaatggggtggtgaa
ggtgacgatagcgtctatggcgacgctggtgccgataccctgtttggcgagaatggaaac
gataccctgaaaggacacgacggttctgacgtcctgcttggtggcgagggcaatgacacg
ctcgatggaatgaacgggtctgatcgcctctatggcgaagcgggcaatgacagcctcgtg
ggcgaccttggggatgaccgcctggaaggaaacgttggtgacgacaccctgtcgggcggg
tcaggaaacgactacctggatggtggagagggcgacgacagtctgtcggggggcaatgca
caggatgctcttttcggcggcgaaggtgcggacacgcttgatggcggcggcgacaatgac
atcctttacggcaacgacgggaccgacagcctggacggtggcagtgccaacgacgctctc
catggtggcgcgggcgcggatacactgaacggcggcgatggcattgacgcggccagctat
gccggttcgtccgaagccgtgtatgtgcgcctggatggtactaacgcatcgaactttacc
ggggatgccgttggagatgtcttctctggcattgaaaacctattcggctccgaacatgac
gaccagttgtacggcgatgcctcccacaacgtgctttggggtgcagacggcaacgatacg
ctcaacgggttggcaggcaacgacgatctgatgggtggagatggcgcggaccggctcatc
ggggacagcggcattgaccgcctctcaggcgaaagcggcgcggacagcctctatggcggc
gcggacagagacttcctgtttggcggagcagacgacgatcatctggaaggtggtgcaggc
aacgacagcttgtcaggtggcgatggcaacgacagcatctacgtcggggcggatgacgcc
aatgtctcgggcaacgacactgctgacggcggagccggagatgatctgatcatcgggtca
aatggctatgaccatctgaaaggtggcgacggcaatgacacgctgaatggcggtgacgac
ctggcgacagccgagcgtgacacgctcgagggcggtaccggcaacgacagcatcacctcc
gggcaagttgtgatacccgacgcagatcgccagatttatggcgactatatgtacggaggc
ggaggtgacgacaccatcaccggtggtaaaggtgacgatgtcatctacaccggcggtcca
actgataacctcgttggctttgatcatgccagcgggggcgacggcgatgacctgatccat
ggctcaaacggcaaggacttgctgtttggcgatgcgggcaatgacactctgacgggcggc
aacgacggtatcacagctgacgctgacacgctggacgggggcgatggcaacgacagcctg
acctcgggacaaaccttggcgccggaagccggacgcgagggccttggtgatcacctgttc
ggtcaagcgggtgacgatacactcacgggcggcgcggccaatgatgttctcaaaggcggc
agtggcaacgacgaactgtggggcggtgatggcaatgacagcatctacagcggtgcagcg
gaagccaatcagtccggtaacgatacggccgatggcggcgcaggcgatgacctgctggtc
gggtctaatggttatgaccacctgaagggcggtgacggcaacgacacgctcaacggcggc
gatgaccttgccaccgcggagcgcgacacgcttgaaggcggtgcgggcaacgacagcatc
acatctggccaggtggaaacgccagatgcagatcgtcaagcttttggtgatcgcatgtac
ggtggtggaggcgacgacaccatcactggtggcaaaggcgatgacgtgatctacacaagt
ggtccaaccgaaaacctggttggtttcgaccacgcaagcggcggggatggtgacgatcag
atctttggctcgaatggcaaagacctgctgcatggagacgctggcaacgacacgcttaca
gggggcgacgacggcatcactgccgatgcggataccctctacgggggcgatggcaacgac
cacctcacctccgggcaaacggatgccccagaagccggtcgggaggctcttggcgaccat
ttctacggtgaagctggcaacgacactctcacggggggcaaggcgaacgactatctcgaa
ggcggaacgggtgcggatagcttcgtgttcctgtccgactttggccaggatacgattgcg
gacttctccaccagccaatcgggcgagacaattgacctgagtggcgtctctcagatcacg
tccttcagcgacctgaccaccaaccacctaacacaatcaggttcggatgccctgatcagt
gatggtgctggcaatacaatcacgctgactggtatcaatatggctgatctcacagccgac
gacttcctgttctga
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integrated database retrieval system
