Ruegeria pomeroyi: SPO3687
Help
Entry
SPO3687 CDS
T00215
Name
(GenBank) decarboxylase, pyridoxal-dependent
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00350
Tyrosine metabolism
sil00360
Phenylalanine metabolism
sil00380
Tryptophan metabolism
sil01100
Metabolic pathways
sil01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
SPO3687
00360 Phenylalanine metabolism
SPO3687
00380 Tryptophan metabolism
SPO3687
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sil04147
]
SPO3687
Enzymes [BR:
sil01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
SPO3687
4.1.1.105 L-tryptophan decarboxylase
SPO3687
Exosome [BR:
sil04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SPO3687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
MoCF_biosynth
Motif
Other DBs
NCBI-ProteinID:
AAV96908
UniProt:
Q5LM77
LinkDB
All DBs
Position
complement(3895880..3897289)
Genome browser
AA seq
469 aa
AA seq
DB search
MKWDEFADWGRRVADWTQDYHLTVGERPVRARTEPGAILNALPATPPETPEAMEDIFRDF
EDIVMPGITHWQHPRFFAYFNSNASAPSVLAEFLASAIAPQCMLWQTSPAATEMETRMMD
WLRQALDLPEGFAGVIQDSASSATLAAVLTLREKALNWQGNRQGLFGQKPLRIYCSSEVH
TSVDRAIWVAGIGQDNLVRIPIKGDWRGMDPDALEAAIKADLAAGRHPAGLILCVGGTGT
GATDPVDRCLDVAEKYGLYTHVDAAWAGSAMICPEFRHYWSGIARADSIVFNPHKWLGVQ
FDCSAHFLKNPDDLVRTLAIQPEYLKTHGRDGIINYSEWSVPLGRRFRALKLWFLMRSYG
MEGLRQRLRNHIAWSGALHDRLTAEPDFEMVTPPMWSLWTFRYRRDGADLDALNLRLVNA
INDDGRIYLTQTRVDGALVIRFQAGQFETTEEDVGMAFDVITEIARALP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgggatgaattcgccgattggggccgacgggtcgccgactggacgcaggactat
cacctgaccgtgggcgaacgaccggtgcgcgcccggaccgagccgggcgcgatcctgaac
gccttgcccgcaacaccgcccgagacgcccgaagcgatggaggatatctttcgcgatttc
gaggatatcgtgatgcccggcatcacccattggcagcatccgcgcttctttgcctatttc
aactccaacgcatcggcgccctcggtgctggccgagttcctggcctcggccatcgcgccg
caatgcatgttgtggcagacctctcccgccgcgaccgagatggaaacgcggatgatggac
tggctgcgccaggcgctggacctgcccgaaggcttcgcgggcgtgatccaggacagcgcc
tcgtcggcgacgctggcggcggtgctgacgctcagggaaaaggcgctgaactggcagggg
aaccggcagggcctgttcggtcagaaaccgctgcggatctattgctcgtccgaggttcat
acctcggtcgatcgcgccatctgggtcgccgggatcggccaggacaatctggttcggata
ccgatcaagggcgactggcgcggcatggaccccgacgcgctggaggccgcgatcaaggcc
gatctggcggctgggcggcatccggcgggcctgatcctgtgtgtgggtggcaccggcacc
ggtgccaccgatccggtggaccgctgtctggacgtggccgagaaatacggcctttatact
catgtggacgcggcctgggccgggtcggcgatgatctgccccgagttccgccattactgg
tccggcatcgcgcgcgccgacagtatcgtgttcaacccgcataaatggctgggggtacag
ttcgactgttcggcgcatttcctgaaaaaccccgacgatctggtgcgcacgctggcgatc
cagccagagtatctcaagacccacggacgcgatgggatcatcaactattcggaatggtcg
gtgccgctgggccgccggttccgggcgctgaaactgtggttcctgatgcgcagctatggg
atggaggggctgcgccagaggttgcgcaaccatatcgcctggtcgggcgcattgcatgac
cggcttaccgccgaaccggatttcgagatggtgacgccgccgatgtggtcgctctggacc
tttcgctatcggcgcgatggggccgacctggacgcgttgaaccttcggctggtcaacgcc
atcaacgatgacgggcgtatctatctgacccagacccgcgtcgatggtgcgctggtgatc
cggtttcaggccggccaattcgaaaccaccgaggaggacgtgggcatggcctttgacgtg
atcaccgaaatcgcccgcgcactgccctga
DBGET
integrated database retrieval system
