Ruegeria pomeroyi: SPO3744
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Entry
SPO3744 CDS
T00215
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sil03032
]
SPO3744 (hup)
03036 Chromosome and associated proteins [BR:
sil03036
]
SPO3744 (hup)
03400 DNA repair and recombination proteins [BR:
sil03400
]
SPO3744 (hup)
DNA replication proteins [BR:
sil03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SPO3744 (hup)
Chromosome and associated proteins [BR:
sil03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SPO3744 (hup)
DNA repair and recombination proteins [BR:
sil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SPO3744 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AAV96965
UniProt:
Q5LM20
LinkDB
All DBs
Position
complement(3955181..3955456)
Genome browser
AA seq
91 aa
AA seq
DB search
MTKTQLVAALAEDMGSDKKTASAALDAVCALITREVSGGGAVTLPGVGKIYCRERPERQV
RNPATGETFTKAADKVVKMTIAKALKDSVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagactcagctcgttgccgcactggccgaggatatgggcagtgacaagaaaacc
gccagcgccgctctggatgcggtctgcgcgctgatcacccgcgaagtgtcgggcggtggc
gccgtgaccctgccgggcgtcggcaagatctattgccgcgagcgccccgagcgtcaggtc
cgcaaccccgccaccggcgaaaccttcaccaaggcagccgacaaggtggtcaagatgacc
atcgccaaggcgctgaaggacagcgtgaacggctga
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integrated database retrieval system
