Ruegeria pomeroyi: SPO3804
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Entry
SPO3804 CDS
T00215
Symbol
dmdC
Name
(GenBank) 3-methylmercaptopropionyl-CoA dehydrogenase
KO
K20035
3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:
1.3.99.41
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00920
Sulfur metabolism
sil01100
Metabolic pathways
sil01120
Microbial metabolism in diverse environments
Module
sil_M00990
Dimethylsulfoniopropionate (DMSP) degradation, demethylation pathway, DMSP => methanethiol
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
SPO3804 (dmdC)
Enzymes [BR:
sil01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.41 3-(methylsulfanyl)propanoyl-CoA 2-dehydrogenase
SPO3804 (dmdC)
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GFIT
Motif
Pfam:
Acyl-CoA_dh_C
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N
Acyl-CoA_dh_2
ACOX_C_alpha1
Motif
Other DBs
NCBI-ProteinID:
AAV97018
UniProt:
Q5LLW7
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Position
4018434..4020200
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AA seq
588 aa
AA seq
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MTYQAPVRDIMFAIEHLSQWPQVEALQTYSEIELDDARAALEEFGRFCGEMIAPLSTIGD
TEGARLENGRVVLPEGYKTAYDQFVDMGWQSLSHPAEHGGMGLPKVVGAAATEIVNSADM
SFGLCPLLTNGAIDALSITGSDAQKAFYLDKLITGRWSGTMNLTEPQAGSDLSRVRCTAV
PQDDGTYAISGTKIFITFGEHDLSENIVHLVLARTPDAPEGVRGLSLFVVPKLLAGEGGE
TSQRNTLGCVSLEHKLGVRASPTAVMEYDNATGYLVGEENSGLRYMFIMMTSARYAVGVQ
GVAIAERAYQHALSYARDRIQSRPVDGSAQDAVPIIQHPDVRRMLLRMRALTEGGRALAI
ATGGWLDLAEHGPEEARAEAQSMAEFLVPLVKGFCTERAVEVASLGVQIHGGMGFIEETG
VAQFYRDARILPIYEGTTAIQANDLLGRKVLRDGGRTARRFAEMIAATEGELSKGGAAAQ
RIAQRLAEARAAFAAGLDHLLATAGQDPNRAYAGSVPFLMLTGNLATGWQLGLSALAAEA
ELAKGGDAEFLQAKIATADIFAQQVLVECSAEHSRITDTGDSLLTASL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaggcgccggtccgtgacatcatgttcgccatcgaacacctttcgcaatgg
ccccaagtcgaggcgctgcaaacctattccgagatcgaactggacgatgcccgcgccgcg
ctggaggaattcggccgtttctgcggcgagatgatcgcccccctgtccaccatcggcgat
accgaaggcgcccggctggaaaatgggcgcgtcgtcctgcccgagggctacaagaccgcc
tatgaccagttcgtcgatatggggtggcaaagcctcagtcacccggccgaacatggcggc
atgggcctgcccaaggttgttggcgccgccgcgaccgaaatcgtcaacagcgccgatatg
agctttggcctctgcccgttgttgaccaacggcgccatcgacgcgctgtcgatcaccggg
tccgatgcgcaaaaggccttctatctggacaagctgatcaccgggcgctggtcgggcacc
atgaacctgaccgagccgcaggcgggcagcgacctcagccgcgtgcgctgcacggcggtg
ccgcaggatgacggcacctatgcgatcagcggcaccaagatcttcatcaccttcggcgaa
catgacctgtcggaaaacatcgtgcatctggtgctggcccgcacccccgacgcacccgaa
ggggtgcgcgggctgagcctgttcgtggtgcccaagctgcttgcgggcgagggcggcgaa
acctcgcagcgcaatacgctgggctgcgtcagcctggaacacaagctgggcgtgcgcgcc
agcccgaccgcggtgatggaatatgacaatgccaccggctatctggtgggcgaggaaaac
agcggcctgcgctacatgttcatcatgatgacctcggcccgctatgcggtgggtgtgcag
ggtgtggcgattgccgaacgcgcctatcagcatgcgctgtcctatgcccgtgaccggata
caaagccgacccgtagacggctcggcccaggacgcggtgccgatcatccagcaccccgat
gtccgccggatgctgctcaggatgcgcgcgctgaccgaaggcgggcgggcgcttgccatc
gccacgggcggctggctcgacctggccgaacatgggcccgaagaggcccgcgccgaggcg
caatcaatggccgaattccttgtgccgctggtcaaggggttctgcaccgagcgcgcggtc
gaggtcgcctcgctaggtgtccagatccacggcggcatgggtttcatcgaggaaaccggc
gtggcccagttctatcgcgatgcccgcatcctgccgatctacgagggcaccaccgccatt
caggccaatgacctgttgggtcgcaaggtgctgcgcgatggcggtcgcaccgcccgccgc
tttgccgagatgatcgccgcaaccgagggtgagctgtccaagggtggcgcggcggcgcaa
cggatcgcccagcgcctggccgaagcgcgcgcggcctttgccgccggcctcgaccatctg
ctggcaaccgccgggcaggaccccaaccgcgcctatgccggcagcgtgcccttcctgatg
ctgaccggcaatctggccacaggctggcagcttggcctgtcggcgctggccgccgaggcc
gagctggccaagggcggcgatgccgagttcctgcaggccaagatcgcaaccgccgacatc
tttgcccagcaggtgctggtcgaatgttcggccgagcacagccgcatcaccgataccggc
gacagcctgctgaccgcatcgctctga
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