Ruegeria pomeroyi: SPO3837
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Entry
SPO3837 CDS
T00215
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sil03016
]
SPO3837 (truB)
Enzymes [BR:
sil01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SPO3837 (truB)
Transfer RNA biogenesis [BR:
sil03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPO3837 (truB)
Prokaryotic type
SPO3837 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AAV97051
UniProt:
Q5LLT4
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All DBs
Position
4052830..4053741
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AA seq
303 aa
AA seq
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MARKRKGRDISGWLVVDKPAGMTSTAVVNKVRWALGANKAGHAGTLDPEATGVLAIALGE
ATKTVPYITDALKAYVFTVRLGQATNTDDAEGEVIASSDLRPTDEQIKDALAPFLGDIMQ
VPPKFSAVKIDGQRAYKLARDGEDVELAARPLWVEELLMLDRPDPDHVLLEMTCGKGGYV
RSIARDLGAALGCYGHVRELRRIWSGPFEAEDGITLEQVEALAKTPELDSYLRPLEEGLA
DLPELKCSPEGAQRLRNGNPGMVYPGEAEYGDEAWASFEGRAVAVGIYKSGELHPARVFA
RPE
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaaacgcaagggacgcgatatttcgggatggctggtggtggacaagcccgcc
ggcatgacctcgaccgccgtcgtcaacaaggttcgctgggcgctgggcgccaacaaggcc
ggtcatgccggaaccctcgaccccgaggccaccggcgttctggccatcgccctgggcgag
gcgaccaagaccgttccctatatcaccgacgcgctcaaggcctatgtctttaccgtgcgc
ctgggccaggcaaccaataccgacgatgccgagggcgaggtgatcgcctccagcgacctg
cgccccaccgatgaacagatcaaggatgctctggcaccgttcctgggtgacatcatgcag
gtcccccccaaattctcggccgtcaagatcgacggccagcgcgcctataaactggctcgc
gacggcgaggatgtagagttggccgcccgcccgctctgggtcgaggagctgctgatgctg
gaccggcccgacccggatcacgtgctgctcgaaatgacctgcggaaagggcggctatgtc
cgctcgatcgcccgcgatctgggtgcagcgctgggctgttacggccatgtgcgcgagctg
cgccgcatctggtcgggccctttcgaggccgaggatggcatcaccctcgagcaggtcgag
gcgctggccaagacacccgaactcgacagctatctgcgccccctcgaagagggcctcgcc
gatctgcccgagttgaaatgcagccccgagggcgcccagcgcctgcgcaacggcaatccg
ggcatggtctatcccggcgaggccgaatatggcgacgaggcctgggcctcgttcgagggg
cgcgctgttgcggtgggcatctacaagtccggcgagctgcatcccgcccgcgtctttgcc
cggcccgagtaa
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