Ruegeria pomeroyi: SPOA0060
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Entry
SPOA0060 CDS
T00215
Name
(GenBank) transcriptional regulator, AraC family
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sil03000
]
SPOA0060
Transcription factors [BR:
sil03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SPOA0060
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Ortholog
Paralog
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GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_Crp_2
MerR
Motif
Other DBs
NCBI-ProteinID:
AAV97200
UniProt:
Q5LLG7
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Position
megaplasmid:56564..57430
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AA seq
288 aa
AA seq
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MLADLFRTANEILGAHAYRVSVHRLAAQPCADPRRWTRRTVILLGDIRTRWSVADPLLPV
LRVLLAQAPRRVLVGGAVFLLRDAGLARNCALAIHSNFCAAAAEEGLEGLPDAPLFHSDG
PVSSAVSGFAAVPLMLDLIAEDHGQVSADALRAYLGLPAPQSQPRSRLSLGLLQRARGDR
LIERTLTLMQEHIEEPLRIGDLAGMLGVSTRKLQRQFLDLTGEGPLAAYRALRIERAQQL
LEQTNLPLTEIIAATGFGTHSNLARWMRKETGASPHILRQRALSGRAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgatctgtttcgcaccgcaaacgagatcctgggcgcccatgcctatcgggtc
tcggtacatcggctggcggcgcagccctgcgccgatccacgccgctggacccggcggacc
gtcatcctgctgggcgatatccgcacacgctggagcgtggcggacccgttattgccggtg
ttgcgggtcctgttggcgcaggcgccgcgccgggtgctggtggggggcgcggtgttcctg
ttgcgcgatgccgggctggcgcggaactgcgcgctggcgatccactcaaacttttgcgcc
gccgccgccgaagaggggttggaggggctgcccgatgcaccgctctttcactctgacggg
ccggtttccagcgcggtcagcggttttgccgcagtgccgctgatgctggacctgatcgcc
gaggatcatggccaggtcagcgcggatgccctgcgcgcctatctgggcctgcccgcgccc
cagtcgcagccccgcagccgcctgagcctgggcctgttgcaaagggcccgcggcgaccgg
ctgatcgagcgcacgctgaccctgatgcaggagcatatcgaggagccgctgaggatcggc
gatctcgcgggcatgctgggggtctcgacgcgcaagctgcaacggcaattcctggacctg
accggcgaggggccgctggccgcctatcgcgccttgcggatcgaacgggcgcagcaattg
ctggagcagaccaatctgccgctgaccgagatcattgcggcgaccgggttcggcacccat
tccaatctggcccgatggatgcgcaaggaaaccggggccagcccgcatatcctgcgccag
cgcgccctgtcgggacgcgcggcctag
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