Ruegeria pomeroyi: SPOA0237
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Entry
SPOA0237 CDS
T00215
Symbol
dctD-2
Name
(GenBank) C4-dicarboxylate transport transcriptional regulatory protein DctD
Organism
sil
Ruegeria pomeroyi
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA
HTH_50
AAA_3
FleQ
AAA_16
bpMoxR
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
AAV97371
RoseoBase_p:
dctD-2
UniProt:
Q5LKZ2
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Position
megaplasmid:259961..261301
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AA seq
446 aa
AA seq
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MEERRPYSILVIDDDKSMRLSLVDLLEAAGWQVEAIARATLVAAKLDDNPPDVILSDIRM
PGMTGLELLSSLDHASAPPLVLISAHGDIPMAVQAMRDGAYSFVEKPYEPRRLLSILTHA
AEQNRMQQDNSRLKERLIRLSGLDRILLGQTAEIVSLRQDILDLAGTRATVLITGETGTG
KELVAHALHDLGGDGQAPFLALNCAALSQDTFETEMFGIAGQSEGRLAKASGGTLFLDEI
CSCPAAVQAKLLRVLEDKQILPVGASSAIKAEFRVISATSEDVQDAVSAGRLRQDLLFRI
NTVVLGLPSLRHRRDDLMLLARHFLEHYAHVYELAVPKMSQDDMAALLAHDWPGNVRELR
NVCERRVLAARRGGGSMARAIAADQQLDDVPGTLREAVAVFERELISKAIQAHEGRMDAA
AEALGIGRRTLNEKIVKLGLDKGALL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaaagacgcccctacagcattctggtcatcgacgatgacaaatccatgcggttg
tcgctggtcgacctgcttgaggcggctggctggcaggtcgaggcgattgcacgcgccaca
ttggtggccgccaagttggacgacaacccgccggatgtgatcctgtccgacatacgcatg
cccggcatgacggggctggaactgttgtcgagcctggaccacgccagcgcgccgccgctg
gtgctgatctcggcccatggggacattcccatggcggttcaggcgatgcgggacggggcc
tatagtttcgtcgagaaaccttacgagccgcgccgtttgctgagcattctgacccatgcg
gcggaacagaaccggatgcagcaggacaattcccggctgaaggaacgtctgatccgccta
tccggcctcgaccgcatcctgctggggcaaaccgcagagatcgtctcgctgcggcaggat
attctggacctcgccggcacccgcgcgacggtgctgatcaccggcgaaaccggcaccggc
aaagagttggtggcccatgcgctgcatgatctaggcggcgatggtcaggcgccatttctg
gcgctcaactgcgcggcgctgtcgcaggacacgttcgaaaccgaaatgttcgggatcgcg
ggacaaagtgaaggacggttggccaaggcctcgggcggaaccttgtttctggacgaaatc
tgctcctgccccgctgcggtgcaggccaagctgttgcgcgttctcgaggacaagcaaatt
ctgccggtcggtgcatcgagcgcaatcaaagccgagttccgggtcatttccgccaccagc
gaggatgtccaggacgccgtgagcgcgggacggttgcgccaagatctgctgtttcgcatc
aacaccgttgttcttggtcttccgtccctgcggcatcggcgcgacgacctgatgctgctg
gcccggcatttcctggaacattacgcccatgtctacgaattggcggtgccgaagatgtcg
caagacgatatggcggcgcttctggcccatgactggcccggcaatgtgcgcgaattgcgc
aacgtgtgcgaacgccgggtgctggccgcgcggcgcggaggtgggtccatggcaagggcc
atcgccgccgatcagcagcttgacgacgttcccggcaccctgcgcgaggcggttgccgtc
ttcgagcgcgagttgatcagcaaggcgatccaggcgcatgaaggccgcatggatgccgcc
gccgaagccttggggatcggtcggcggacactgaacgaaaagatcgtcaagctcgggctc
gacaagggcgcgttgctctga
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