Ruegeria pomeroyi: SPOA0240
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Entry
SPOA0240 CDS
T00215
Name
(GenBank) TRAP transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SPOA0240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPOA0240
Transporters [BR:
sil02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SPOA0240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
Deltameth_res
Motif
Other DBs
NCBI-ProteinID:
AAV97374
UniProt:
Q5LKY9
LinkDB
All DBs
Position
megaplasmid:263144..264544
Genome browser
AA seq
466 aa
AA seq
DB search
MDSIDIGLWVTGGLLVLVLTGMRVAFAAALAGLVGLVWIFWAKFGYDPDRFGKALTVAVK
TAGQVPHSKVSSQALSLIPTFILIGYLAYYAGLTRALFEAAKRWMAWVPGGLAVSTVFAT
AGFAAVSGASVATSAVFARIAIPEMLAIGYNKRFAAGVVAAAGTLASLIPPSAILVIYAI
IVEQDVGKLLLAGFVPGAFSAVIYVALIVGIAVVFKSVGPPVTGFTWRQRFASLPGALPI
VFVVVIIISFVYNPFGGDAWGTPTEGGALGAFVVFCMAVFRGMKWAEFKSALLETAKLTV
MIFTIIWGVLIYVRFLGFADLPGAFSDWITSLQMSPMLILVCILLAYAVLGMFMDAIGML
LLTLPVVYPAVMALNGGEAVSAADSAFGMSGPMCAIWFGILVVKMAEFCLITPPIGLNCF
VVAGVRPDLSVQDVFRGVMPFFVADAVTIALLVAFPQIVLWLPGQV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggatagtatcgatatcggcctctgggtcaccggcggccttctggttctggtcctgacc
ggcatgcgggtggcctttgccgccgcgctggcggggttggtggggctggtctggatcttc
tgggccaagttcggctatgaccccgaccgctttggcaaggcgctgacggtggcggtcaag
accgccgggcaggtgcctcattccaaggtgtcgagccaggcgctgagcctgatcccgacc
ttcatcctgatcggatacctggcctattacgccgggctgacgcgggcgctgttcgaggcg
gccaagcgctggatggcctgggtgccgggcgggctggcggtgtcgacggtgtttgccacc
gcgggctttgccgcggtgtccggggcatcggtggcgacctcggcggtgtttgcccgcatc
gccatccccgagatgctggcgatcggctataacaagcgctttgcggccggcgtggtggcg
gcggcgggcacgctggcctcgctgatcccgccctcggcgatcctggtgatctatgcgatc
atcgtggaacaggatgtgggcaagctgttgctggcgggctttgtgcccggcgccttcagc
gcggtgatctatgtggcgctgatcgtgggcatcgcggtggtgttcaaatcggtgggcccg
ccggtgaccggcttcacctggcggcagcggttcgcatcgctgccgggcgcgctgcccatc
gtgttcgtggtcgtgatcatcatctcctttgtctacaacccctttggcggcgatgcctgg
ggtacgcccaccgagggcggcgcgctgggggccttcgtggtgttctgcatggcggtgttc
aggggcatgaaatgggccgagttcaagagcgcgctgctggagacggccaagctgacggtg
atgatcttcaccatcatctggggggtgctgatctatgtgcgcttcctgggctttgccgac
ctgcccggcgccttctcggactggatcaccagcctgcagatgtcgccgatgctgatcctg
gtctgcatcctgttggcctatgcggtgctgggcatgttcatggatgcgatcggcatgctg
ctgttgaccctgccggtggtctatccggcggtgatggcgctgaacggcggcgaggcggtc
agcgccgccgacagcgcattcggcatgtcgggcccgatgtgcgcgatctggttcggcatc
ctggtggtgaaaatggccgagttctgcctgatcaccccgccgatcgggctcaactgcttc
gtcgtggccggcgtgcgcccggatctcagcgtacaggacgtgttccgcggcgtgatgccc
ttcttcgtcgccgacgccgtaaccatcgccctcctcgtcgccttcccgcaaatcgtccta
tggctgccggggcaagtctga
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