Ruegeria pomeroyi: SPOA0242
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Entry
SPOA0242 CDS
T00215
Name
(GenBank) transcriptional regulator, LacI family
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sil03000
]
SPOA0242
Transcription factors [BR:
sil03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SPOA0242
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
AbiEi_4
Xre-like-HTH
HTH_Crp_2
TetR_N
MarR_2
HTH_3
Sigma70_r4
HTH_24
HVO_A0261_N
TrmB
GntR
HTH_AraC
HTH_10
Sigma54_DBD
HTH_23
HTH_IclR
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AAV97376
UniProt:
Q5LKY7
Structure
PDB
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Position
megaplasmid:complement(265820..266860)
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AA seq
346 aa
AA seq
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MDSRKPGHRPVTMRDVAKAAGVSRMTVSRALKKDSPISSETRERILKVVKDMNYVPDQVA
GSLTTKRSGFVGLLLPSLNNLHFAQTAQSLTDVLEQGGLQLLLGYTAYSPEREEQLVETM
LRRRPEAMVLSYDGHTEQTIRLLQRASIPIVEIWEKPAHPIGHTVGFSNERAAYDMTNAL
LARGFRKIVFLGEKDDDWTRGAARRAGFKRAMREAGLNPDQEIRLGAPPLSIEDGVAAAE
LILQEYPDTDCIFCVSDMPAFGLLSRLKSIGVAVPEQVSVVGFGNFEVSRFASPEISTVR
VDPIAIGRETGSLILRLLDPKQRSPQTAQHITLPPVLEFRPSLKNL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaggaaacccggtcacagacccgtcacgatgcgcgatgtcgccaaggcggcg
ggtgtatccagaatgacggtcagccgtgctttgaagaaggacagcccgatttcttccgag
acgcgggagcgcatcctgaaggttgtcaaggacatgaactatgtcccggatcaagtcgcg
ggctcattgacaacaaaaaggtcagggtttgtcggcctcttgttgccctcgctgaacaac
ctgcactttgcgcagacagcgcaatccctgaccgatgtacttgaacagggcggactgcaa
ttgctcctgggctataccgcctattcacccgagcgagaggagcagcttgtcgaaaccatg
ctacggcgccgtcccgaggcgatggttctatcttatgacggtcacaccgaacagaccatc
cggttgctgcaacgcgcctcgatccccattgttgagatctgggagaaaccggcccatccg
atcggccacaccgtcggcttctccaacgaacgtgccgcctatgacatgacgaacgcgctg
ttggcacggggctttcgcaagatcgttttcctgggcgaaaaggatgatgactggacccga
ggagccgccaggcgggccggtttcaagcgcgctatgcgcgaggccggtctgaaccccgac
caagagatccgtcttggcgcaccgcccttgtcgatcgaagatggtgtcgccgcggcagag
cttatcctgcaggaataccccgatacggattgcatattctgtgtctctgacatgcctgca
tttggcctgttgagtcggctgaaaagcatcggggtcgccgtacccgaacaggtctctgtg
gtcggtttcggcaatttcgaggtctcccgttttgcctcgcccgagatcagcaccgtgcgg
gtcgatcccattgcgatcggtcgtgaaaccggctcgctgatccttcgtctcctggacccg
aaacagagatctccccagacggcccaacatatcacattaccgcccgtgctagagtttcgc
ccgagtctgaagaacctctga
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