Ruegeria pomeroyi: SPOA0253
Help
Entry
SPOA0253 CDS
T00215
Name
(GenBank) ribose ABC transporter, periplasmic ribose-binding protein
KO
K10910
autoinducer 2-binding periplasmic protein LuxP
Organism
sil
Ruegeria pomeroyi
Pathway
sil02020
Two-component system
sil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SPOA0253
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPOA0253
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AAV97387
UniProt:
Q5LKX6
LinkDB
All DBs
Position
megaplasmid:complement(277117..278247)
Genome browser
AA seq
376 aa
AA seq
DB search
MATSAFCAISSAALADGGQTKLPLLELPGIEDRDYWVPGEVNVEGKLEAMQAVVGAKAVP
FAGTQAEPIQIAMIYPSADTSDFWARNYIAMTKRLEELGIQFETTEFASRQIEHSLQSTY
ANQVVQDADLYDFVIFGPSELAIQADNIDKMAASEGFSTFVWAFHTPLKDLKNQPDGWFD
FSSAAGALTMCDYMLGRLGNDVTMAMNRGIPGITDDQRSGDFKACVEEKGNWTTIYEHYG
EYQREGGFEGTSLILQAYPEATVIHNANTAMAMGSVEAQISVGKEKEVFSTGWGGTGLEL
DAIRRGELDATPMRMGDDVGAATAEAIKAHLEGRSDELPFVFLGRITVAHDQMSAEEIDA
LEAEAFRFSGVGALER
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaagcgcattctgtgccatttcttcagctgccctggccgatggtggccaaacc
aaactgcccctgctggaattgccgggcatcgaagaccgagattattgggttcccggcgag
gtgaatgtcgaaggcaagctggaagccatgcaggcggttgtcggcgccaaggcggtgccc
tttgccgggacacaggcagagcctattcagatcgctatgatctatccctcggcggatacg
tccgatttctgggcgcgcaactacatcgccatgaccaagcgcctggaagagctgggcatt
cagtttgagacgaccgaattcgcaagccgtcagatcgaacattcgctgcaatcgacttat
gccaaccaggttgtgcaggatgccgatctttatgactttgtgatcttcggcccctctgaa
ctggcaatccaggcggacaatatcgacaagatggcggcgagtgaggggttttcgaccttt
gtctgggctttccatacgccgctgaaggatctgaagaaccaaccggacggctggttcgat
ttcagctcggcggccggggccctgaccatgtgcgactatatgctgggtcggctgggcaat
gatgtgaccatggcgatgaaccgcgggattccggggatcaccgacgaccagcggtcaggc
gacttcaaagcctgcgtcgaggaaaagggcaactggaccacgatctatgaacactatggc
gagtatcagcgggaagggggctttgagggcacttcactgatcctgcaagcctatcccgaa
gccacggtcattcacaacgccaacaccgccatggccatgggttcggtcgaagcacagatc
tccgtcggcaaagagaaggaagtcttctcgaccggatggggtggcaccggcctggagctt
gacgcgatccgccgtggagagcttgacgcgaccccgatgcggatgggcgacgatgttggc
gcggccacggcagaggcgatcaaggcgcatctggaaggacgctcggatgagttgccgttt
gttttcctggggcggatcactgtcgctcatgaccagatgtcggccgaagagatcgacgca
ctggaggcggaagcattccgtttctcgggggttggcgctctggaacgctaa
DBGET
integrated database retrieval system
