Ruegeria pomeroyi: SPOA0254
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Entry
SPOA0254 CDS
T00215
Symbol
rbsC-1
Name
(GenBank) ribose ABC transporter, permease protein
KO
K10440
ribose transport system permease protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SPOA0254 (rbsC-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPOA0254 (rbsC-1)
Transporters [BR:
sil02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
SPOA0254 (rbsC-1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
VirB3
Motif
Other DBs
NCBI-ProteinID:
AAV97388
RoseoBase_p:
rbsC-1
UniProt:
Q5LKX5
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Position
megaplasmid:complement(278352..279479)
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AA seq
375 aa
AA seq
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MTTTTTNLQSKTLMERLEPYLAIIGPMVMIFAILLFMGVAEPARYFRLSNLNLILLDAAL
YMPMAMAMTFVITQRGIDLSIGSIAALSGILMAFLIKQYGFPAWVAMPLAIVLGATMGLI
NGLIITRFKVPDLIGTLAMDLVYRGLALVIAKGLVLARFPDLITEMGRGQIPGFIPVPVV
IGLLTMALGYWALTRTHFGRYTISIGSNPEASEMTGIAVDRHKIYAYVLMGASAALAGVM
LTGKLNAIQATSAPYFNLHVIAAVVVGGTSLFGGRASMLGSLAGVLLLSMMINALVTLRI
EFFWQSVASGAVIVSSVALYTWMQKKDRDGSRSLLAGLRTSEAQKLMKFSALLIGLLILL
LAVGAGLATDPKPTG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacaacaaccaacctgcaaagcaagactctcatggagcggcttgaaccctat
ctggcgatcatcggccccatggtcatgatctttgccattctgctgttcatgggtgttgcc
gaaccggcgcgctatttccgcctgtcaaacctgaacctgatcctgctggatgcggcgctt
tacatgcccatggcaatggccatgacatttgtgatcacgcagcgcgggatcgacctgtcg
atcggttccatcgcggccctctcgggcattctgatggcctttctgatcaaacagtacggc
tttccggcctgggtggccatgcccctggcgattgtcctgggcgccacgatgggcttgatc
aatggcttgatcattacccgtttcaaggtgcccgacctgatcggcaccctggcgatggac
cttgtctatcgcgggctggcgctggtcatcgccaagggtctggttctggcgcgtttcccc
gatctcatcaccgaaatgggccgtggtcagatccctggattcatcccggtgccggtggtg
atcgggctgttgacgatggctctgggctattgggcactgaccagaacccactttggccgc
tacaccatctcgatcggctcgaaccccgaggccagcgagatgaccggcatcgccgtcgat
cgtcacaagatctatgcctatgtcctgatgggcgccagtgccgcgctggccggggtgatg
ctgaccggcaagctgaacgctatccaggcaacatcagcgccctatttcaacctgcatgtg
atcgcggcggttgtggttggcgggacgtctctctttggcgggcgggcctcgatgctgggg
tcgctggcgggtgttctgctgttgtcgatgatgatcaacgccctggtgaccctgcggatc
gagttcttctggcaatccgttgcgtcgggcgccgtgatcgtcagctctgtcgcgctttat
acctggatgcagaagaaggaccgtgacggctcgcggagcctgctggcgggtctgcggaca
tccgaagcgcaaaaactcatgaaattctcagccctgcttatcgggttgttgatcctgttg
ctggcggttggagccgggctggcaaccgatccaaagccaaccggctag
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