Ruegeria pomeroyi: SPOA0256
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Entry
SPOA0256 CDS
T00215
Name
(GenBank) ribose ABC transporter, periplasmic ribose-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02010
ABC transporters
sil02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SPOA0256
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SPOA0256
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPOA0256
Transporters [BR:
sil02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
SPOA0256
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AAV97390
UniProt:
Q5LKX3
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All DBs
Position
megaplasmid:complement(280380..281426)
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AA seq
348 aa
AA seq
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MLKRTFMAVSTAALLSGLGVPVFAETPFDGPTTGPAAAEGKSIVVVAGDLKNGGILGVTN
GVKEAVEAIGWELRILDGAGSIQGRTAAIGQAMALRPDGIIINGFDAVEQQAALEGVVSA
SIPMVAWHSGPKIGCDAPGGIFANVSTDAMTVSEVAAKWAMEEGGSNVGAVIFTDSTYQI
AIDKADRIKETIEAMGGTVLEYVDTPIADTSSRMGPLTTSLLQKYGDQWTHALAINDLYF
DFMGPALASAGIKSADGPQAGSAGDGSEAAFQRIRSGNYQAITVAEPLNLQGWQLVDELN
RAIQGEACSGYVTTPALVTKDGLEKLGESNQFDPDSPYRQAYQAIWGN
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacggactttcatggcggtatcaactgccgcactactctccggtctgggtgta
ccggttttcgcagaaacaccctttgacggccccaccacgggcccagcggcggcagaggga
aaatccatcgtcgttgttgccggtgacctgaagaatggcggcattctgggggttaccaac
ggggtgaaagaggctgttgaggccatcggatgggaactgcgcatcctcgacggtgcgggt
tcgatccaggggcgcacggcggccatcggtcaggccatggcgctcaggcctgatggcatc
atcatcaacgggtttgatgcggttgaacagcaggcagcccttgaaggtgtcgtgagcgcc
agcatcccgatggtggcctggcattccggccccaagattggctgtgatgcgcccggcggc
atttttgcgaatgtctcgaccgatgcgatgaccgtttccgaggtcgccgcaaaatgggcg
atggaggaaggcggcagcaatgtcggcgctgtgatctttaccgacagcacctatcagatc
gccatcgacaaggccgaccgcatcaaggaaaccatcgaagcgatgggcggtacggttctg
gaatatgtcgatacgccgatcgcggatacgtcatcccgcatggggccgctgacaaccagc
ctgcttcagaaatacggtgaccagtggacacatgcgctggcgatcaacgatctctacttc
gacttcatggggcctgcccttgcgtcggccggaatcaagagcgcggatggtccgcaggcg
ggttccgcaggtgacggctccgaggcggcgttccagcgtattcgctcgggcaactatcag
gcgatcaccgtggcggaaccgctgaacctgcaaggctggcagttggttgatgagctgaac
cgcgccatccagggcgaggcatgctcgggctatgtcacaacacctgcactggtgaccaaa
gacggtctggagaagctgggcgagtcaaaccagttcgacccggatagtccctatcgtcag
gcctatcaggcgatctggggcaactag
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