Ruegeria pomeroyi: SPOA0259
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Entry
SPOA0259 CDS
T00215
Name
(GenBank) transcriptional regulator, LacI family
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sil03000
]
SPOA0259
Transcription factors [BR:
sil03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SPOA0259
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_10
HTH_6
HTH_23
HTH_38
HTH_31
HTH_IclR
TetR_N
HTH_3
MarR
Motif
Other DBs
NCBI-ProteinID:
AAV97393
UniProt:
Q5LKX0
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All DBs
Position
megaplasmid:284124..285167
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AA seq
347 aa
AA seq
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MSSTQNKPNKNNKVSLAQIAKAAGVSKMTASRVLRDEGGFSESTRARVMAEIDRLGYVPN
RLATVFAGDQRSTFVGVSIPELGNEIFAQVLEGIDRKLGAFGHQTVLGMTEHALEQEEKW
LETVLSWQPAGLIVTGRSHTPKSIQLLSGAGIPLVEIWDFNSSPLDMSVGLNHFDSGYSM
GRYLTGLGYRQFGYVGTSHDTANAASARLAGYAKVIGDSGGSLKKQLLLKDAPGFYTGYY
GTEQLLAANSDVEVIYYQNDNMAVGGLNYCQKRGLSIPGDIGIAGWGDLPIASILPYRLT
STAVPHLRIGMIAAEMVLSQINGEARRRSQDVGFTLIPGSTVRSQLE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtacccagaataaaccaaacaaaaacaacaaggtaagccttgcgcagatcgcc
aaggcggccggtgtgtccaagatgacggcaagtcgtgtcttgcgggacgagggcggattt
tccgaaagcacccgcgccagggtcatggctgagatagaccggcttggctacgttccgaat
cgccttgccacggtttttgcgggggatcagcgctccacctttgtcggcgtttccatcccc
gaactgggcaacgagatctttgcccaggtccttgaagggatcgaccggaaactgggggcc
ttcgggcatcaaaccgttctggggatgaccgaacacgccctcgaacaggaagagaaatgg
cttgaaaccgtgctctcctggcaaccggcgggcctgatcgtgacggggcgctctcatacg
ccgaaatcaattcagcttctgagcggcgcgggtattccgctggtcgaaatctgggacttc
aattccagtccgctggatatgtcggtcgggctgaaccactttgacagcggctacagtatg
gggcgctacctgacgggcctcgggtatcggcaattcggctatgtcggcacttcgcacgac
accgcaaatgccgccagtgcccgcctggcgggatatgccaaggtgattggcgattcaggg
gggtccttgaaaaagcaactcctcctgaaagatgcgccggggttctataccggctactac
ggcaccgaacagcttttggccgcaaacagtgatgttgaggtgatctattaccagaacgac
aatatggccgttggcggcctgaactattgtcaaaagcgcgggctttccatcccgggcgat
atcggcattgcgggctggggagatctgccgatcgcgtcaattctaccctatcggctcacc
tcaaccgcagttccccacctgcggatcggtatgatcgcggccgaaatggttctgtcccag
atcaacggcgaggcgcgccgaaggtctcaggacgttggtttcacgctcatccccggctcg
accgtccgctcccaactggaatag
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