Ruegeria pomeroyi: SPOA0275
Help
Entry
SPOA0275 CDS
T00215
Symbol
gabD-3
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00250
Alanine, aspartate and glutamate metabolism
sil00310
Lysine degradation
sil00350
Tyrosine metabolism
sil00650
Butanoate metabolism
sil00760
Nicotinate and nicotinamide metabolism
sil01100
Metabolic pathways
sil01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SPOA0275 (gabD-3)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SPOA0275 (gabD-3)
00310 Lysine degradation
SPOA0275 (gabD-3)
00350 Tyrosine metabolism
SPOA0275 (gabD-3)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SPOA0275 (gabD-3)
Enzymes [BR:
sil01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SPOA0275 (gabD-3)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SPOA0275 (gabD-3)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SPOA0275 (gabD-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AAV97409
RoseoBase_p:
gabD-3
UniProt:
Q5LKV4
LinkDB
All DBs
Position
megaplasmid:302576..304036
Genome browser
AA seq
486 aa
AA seq
DB search
MTTLALNDPGLLETRAYVNGVWIEGGARFAVQDPATGDLIAEVADLGAADTAAAIDAAHA
AGPGWAALTGKERGAILRRWHDLMIQNADDLATILTAEMGKPWAEARGEILYGASFLEWF
AEEAKRVYGETIPGHQRDKRIVVLKQPVGVVGSITPWNFPNAMIARKVAPALAVGCTFVA
RPAELTPLSALAMAVLAERAGVPAGVFNVIPSQDAAGVGAELCANPKVAKITFTGSTRVG
RLLMQQCAPTIKKMSLELGGNAPFIVFDDADLDAAVDGAMIAKFRNNGQTCVCANRIYVQ
ARVYDAFADKLAAKAAQLRVGNGFDTGVTTGPLINSAAVSKVEAHIADALAGGAEVVLGG
TRAPLGGTFFAPTVLRDVTRDMLVCREETFGPLAALVRFESEDEVIDMANDSEFGLAAYF
YSRDLARVWRMAEALESGMVGVNTGLISTEVAPFGGIKQSGLGREGSRHGIEDYLELKYL
CLGGIG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcttgcattgaacgatccgggcctgctggaaacccgcgcctatgtgaacggg
gtctggatcgagggcggcgcgcgctttgccgtgcaggatcccgccaccggcgacctgatc
gccgaagtggccgatctgggcgccgccgacaccgccgccgcgattgatgcggcccatgct
gcgggcccgggctgggcggcgctgacgggcaaggagcgcggcgcgatcctgcgccgctgg
catgacctgatgatccagaatgccgacgatctggccaccatcctgaccgccgaaatgggc
aagccctgggccgaggcgcggggcgagatcctctatggcgcctcatttctggaatggttc
gccgaagaagccaaacgggtctatggcgagaccatccccggccatcagcgcgacaagcgg
atcgtggtgctgaaacagccggttggcgtggtcggctcgatcacgccctggaactttccc
aacgcgatgatcgcgcgcaaggtcgctccggcactggcggtgggctgcacctttgtggcc
cgacctgccgagctgacgccgctatcggcgctggccatggcggtgctggccgaaagggcg
ggtgtcccggcgggggtgttcaacgtgatcccctcgcaagatgcggcgggggtcggggcc
gaactttgcgccaatcccaaggtcgccaagatcacctttaccggctcgacccgggtgggc
cgcctgctgatgcagcaatgcgcccccaccatcaagaagatgtcgctggaactgggcggc
aacgcgcccttcatcgtgttcgacgatgccgatctggatgccgccgtcgacggggcgatg
atcgccaagttccgcaacaacggccagacctgcgtctgcgccaaccggatctatgtgcag
gcccgcgtctatgacgccttcgccgacaagctggccgccaaggccgcccagctgcgggtc
ggcaacggctttgacaccggggtcaccaccggaccgctgatcaacagtgcggcggtatcc
aaggtcgaggctcatatcgccgatgcgctggctggcggggccgaagtggtgctgggcggc
acccgcgcgccgctgggcggcaccttctttgcgccaaccgtgctgcgtgacgtgacccgc
gacatgctggtctgtcgcgaagagacctttggcccgctggccgcgctggtgcgcttcgag
agcgaggacgaggtgatcgacatggccaatgacagcgagttcggtctggccgcctatttc
tacagccgcgatctggcgcgggtctggcggatggccgaagcactggaaagtggcatggtc
ggcgtcaataccgggctgatctcgaccgaggtcgcacccttcggcggcatcaagcaatcg
ggccttggccgcgaaggctcgcgtcacgggatagaggattatctggaactgaaatatctc
tgcctgggcgggatcggctga
DBGET
integrated database retrieval system
