Ruegeria pomeroyi: SPOA0314
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Entry
SPOA0314 CDS
T00215
Name
(GenBank) transcriptional regulator, LysR family
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sil03000
]
SPOA0314
Transcription factors [BR:
sil03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SPOA0314
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AAV97446
UniProt:
Q5LKR7
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Position
megaplasmid:349404..350270
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AA seq
288 aa
AA seq
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MTASLTALRAFDAAARNGSFRAAAADLNVTPTAISHHIRGLEDQLGVKLFRREGRDVALT
DDGRRLADATNQAFGLLDNAVQSLRRSARKAVRVSAGPIFTARWLMPRISDFWEAHREIE
LEVVPAIHPGARDRENVDIVIRWDRIADMGRDAVKLLELSPVAIASEDFVAKRGPIDHPK
DLLILPLLHQRNHWGWLDWFEAMGVSLADPLYGPIFEDANVLLRGAAEGQGAIIGWLPLI
DQDLAEKRVVRVFDERIAPTHGYFVDVQHNSRARVEVRAVEDWLISQS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcctctctcacagccctacgtgccttcgacgccgccgcccggaacgggagtttt
cgggcagcggcggcggatcttaacgtgaccccgacagcaatcagtcatcatattcgcgga
ttggaggaccagcttggcgtcaagcttttcaggcgcgaaggtcgtgatgtcgccctaaca
gacgatggaaggcgtttggccgatgcgaccaatcaggcctttggcctgttggacaatgcg
gttcaatcccttcggcgaagcgcccgaaaagcggtgcgagtttcggcggggccgatcttt
acggcgcgctggctgatgccgcggatcagtgatttctgggaggcccatcgcgagatcgaa
ttggaagtggtgccagccattcatcccggcgcacgcgaccgcgagaatgtcgatatcgtc
atccgctgggaccgcatcgccgacatgggccgtgatgcggtcaaactgctcgagctcagc
cccgttgccatagcatctgaagatttcgttgccaaacgaggccctatcgatcaccccaag
gatctgttgatcctgcccctgttgcaccaaagaaatcactggggatggctggactggttc
gaagcaatgggagtttcactagccgacccgctctacggaccgatcttcgaggatgcaaac
gtgttgttgcgcggcgctgccgaaggtcaaggggcaatcattggctggcttccattgatc
gaccaggatctggcggaaaagagagtcgttcgggttttcgatgaacgtatcgccccgacc
catggctattttgtcgacgtccagcacaacagcagggctcgtgttgaggttcgagcggtt
gaggattggctaatctcgcaatcatga
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integrated database retrieval system
