Ruegeria pomeroyi: SPOA0315
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Entry
SPOA0315 CDS
T00215
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00020
Citrate cycle (TCA cycle)
sil00480
Glutathione metabolism
sil00720
Other carbon fixation pathways
sil01100
Metabolic pathways
sil01110
Biosynthesis of secondary metabolites
sil01120
Microbial metabolism in diverse environments
sil01200
Carbon metabolism
sil01210
2-Oxocarboxylic acid metabolism
sil01230
Biosynthesis of amino acids
sil04146
Peroxisome
Module
sil_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sil_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPOA0315 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
SPOA0315 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SPOA0315 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SPOA0315 (icd)
Enzymes [BR:
sil01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
SPOA0315 (icd)
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GFIT
Motif
Pfam:
IDH
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
AAV97447
RoseoBase_p:
icd
UniProt:
Q5LKR6
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All DBs
Position
megaplasmid:351557..353770
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AA seq
737 aa
AA seq
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MAEKMNSDILYTIVDEAPELASASFLPIIRKFVSAADITVGTPDISLAGRIIATFPENLT
ADQRQSDDLAALGELVKTPTANVIKLPNISASVPQLVAAIEELQNQGYDIPSYPEAPATD
AEKDIRARYDAIKGSAVNPVLREGNSDRRSAKAVKSYAQKNPHSMGEWVSTSKTKVSSMP
GNDFYANEKSATITAAQAGKARIEFIGADGSVSELKKNWQLDEGTVADATFMSVKALGAF
LAEAIEDTKADGTMFSLHMKATMMKVSDPIIFGHAVKAWLAPVFEQYGDRMAALGVNPNS
GLGDLLERVKGDAEILAAIEAVKADRPAMYMVDSDKGITNLHVPSDVIIDASMPAVIRAG
GKGWDQTGAKGDTNCVIPDRCYATVYDETINFFKANGALDVTTAGSVANVGLMAQKAEEY
GSHPTTFEAPANGTIRIVLANGDVLHSHAVEAGDIWRACTVKKAPIENWIQLAMDRQRLT
GSEAIFWLDANRAHDAQLIAYVKPVLEAAGVADKFQILAPREATAQSLKTITAGKDSIAI
TGNVLRDYLTDLFPILELGTSAKMLSIVKLMQGGGLFETGAGGSAPKHVQQLVEENHLRW
DSMGEFCALGESLNFLADSRGNAKAGVLGRAAEAATQGILDFNRSPSRKVGQPDNRDSHY
WFARYWAEALAAQSDDADLAAEFAPLANALADGEQAILTELAAAQGKAADIGGYYKPSAD
LKAAIMRPSATLNAIIG
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaatgaactccgacatattgtataccattgtagacgaagcgccggagctg
gccagcgcctcgttcctgccgatcatccgcaagttcgtttcggcggcggatatcacggtt
ggaacccccgatatctcgctggcgggccgcatcatcgccaccttcccggaaaacctgacc
gccgatcagcgccagtccgacgatctggccgccctgggcgagctggtgaagacgcccacc
gccaatgtgatcaagctgcccaacatctcggcctcggtgccgcagctggtggccgcgatc
gaggaattgcagaaccagggttatgacatcccgtcctatcccgaggcgcccgccaccgac
gcggaaaaggacatccgcgcgcgttatgacgcgatcaagggctcggcggtgaacccggtc
ctgcgcgaaggcaactcagaccggcgctcggccaaggcggtcaagagctatgcgcagaag
aacccgcattcgatgggtgaatgggtctcgacctcgaagaccaaggtcagctcgatgccg
ggcaacgatttctatgccaacgagaaatcggccaccatcaccgccgcgcaggcgggcaag
gcacggatcgagttcatcggtgccgatggcagcgtgagcgagctgaagaagaactggcag
ctggacgaaggcaccgttgccgatgcgacctttatgtcggtcaaggcgctgggtgcgttc
ctggccgaggccatcgaggacaccaaggccgacggcaccatgttctcgctgcacatgaag
gccacgatgatgaaggtcagcgacccgatcatctttggccacgcggtcaaggcctggctg
gcgccggtgttcgaacagtatggcgaccgcatggcggcgctgggggtaaacccgaattcc
ggtctgggcgacctgctggagcgggtcaagggcgacgccgagatcctggccgccatcgag
gcggtcaaggcggatcgtccggccatgtacatggtcgacagcgacaagggcatcaccaac
ctgcacgtgccgtctgacgtgatcatcgacgcctcgatgcccgccgtgatccgcgcgggc
ggcaagggttgggatcagaccggcgccaagggcgacaccaattgcgtgatccccgaccgc
tgctatgcgaccgtctatgacgagaccatcaacttcttcaaggccaacggcgcgctggac
gtgaccaccgccggttcggtggccaacgtcggcctgatggcccagaaggccgaggaatac
ggcagccacccgaccacgttcgaggcgcccgccaacggcaccatccgcatcgtgctggcc
aatggcgacgtgctgcattcgcatgcggtcgaggcgggcgatatctggcgcgcctgcacc
gtcaagaaggcgccgatcgagaactggatccagctggcgatggaccgtcagcgcctgacc
ggctccgaggcgatcttctggctggatgccaaccgtgcccatgacgcgcagctgatcgcc
tatgtcaaaccggtgcttgaggcggcgggcgtggccgacaagttccagatcctggccccg
cgcgaggcaacggcgcaatcgctgaagaccatcaccgcaggcaaggacagcatcgccatc
accggcaacgtgctgcgcgattacctgaccgacctgttcccgatcctggagctgggcacc
agcgccaagatgctgtcgatcgtcaagctgatgcagggcggcgggctgttcgagaccggc
gccggtggttcggcccccaaacacgtgcagcagctggtcgaggaaaaccacctgcgctgg
gattcgatgggtgaattctgcgcgctcggggaaagcctgaacttcctcgccgacagccgc
ggcaatgccaaggccggggtgctgggccgcgccgccgaggcggcgacccagggcattctg
gatttcaaccgcagccccagccgcaaggtgggccagcccgacaaccgcgacagccattac
tggttcgcccgctactgggccgaggcgctggcggcgcaatccgacgatgccgatctggcc
gccgagtttgccccgctggccaatgcactggccgatggcgaacaggcgatcctgaccgaa
ctggccgcagcccagggcaaagcggccgatatcggcggctattacaagccctcggccgat
ttgaaggccgcgatcatgcggccctcggccacgctgaacgcgatcatcggctga
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