Ruegeria pomeroyi: SPOA0335
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Entry
SPOA0335 CDS
T00215
Name
(GenBank) TRAP dicarboxylate family transporter, DctP subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
sil
Ruegeria pomeroyi
Pathway
sil02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SPOA0335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPOA0335
Transporters [BR:
sil02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SPOA0335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
AAV97467
UniProt:
Q5LKP6
LinkDB
All DBs
Position
megaplasmid:complement(376203..377222)
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AA seq
339 aa
AA seq
DB search
MRRYISQLIATAVFGAALAGSAAAQEYSFRFQSSDPAGNANFILQKSWAEDVRERTGGKV
AIELLPVNTIVAHTETQDAVAAGIIDGHFTDTSYFAGKEPAFGLIANPVGAWSDPQQMFD
FMENGGGKELMNSLVEPYGLHFIGATTPGLEAFVSKVPLDGVDDLKGIKMRAPEGMVQRV
FAAAGAVPVNLPGSEVFTSLDKGVIDAADYTVFSTNHEQGMHDIAKHPVYPGFHSMPLVE
VSMNKTTWESLPADIQATLEQSVSDFARRQVSTLAERDAVAVAAAAADGVTVHDWSAEER
ARFRAIAKGEWEAAAGASDASARVYSTLTKYLSDNGLLE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagatatatttctcaactcattgcgaccgcagtgttcggcgcggctttggcagga
agtgccgcagcccaagagtacagcttccgctttcagtcctcggacccggcgggcaacgcg
aacttcatcctgcaaaaatcctgggcagaggatgttcgtgaaagaaccggcggaaaggtc
gcgatcgagctccttccggtcaacaccatcgtcgctcataccgagacacaggacgcggtc
gccgcaggcatcatcgacggccatttcaccgatacatcctacttcgcgggaaaagagcct
gcctttgggcttatcgccaaccctgtcggtgcctggtctgacccacagcagatgttcgac
ttcatggagaacgggggcggcaaagagctgatgaattcgctcgtcgaaccttatgggctt
catttcatcggcgccacgacacccgggcttgaggcgttcgtatccaaggtgccgctggat
ggggtggatgacctcaagggtatcaagatgcgcgcgcccgagggtatggtgcagcgtgtt
ttcgcggctgccggcgcggtgccggtcaacctgcccggcagcgaggtgttcacctcactg
gacaagggcgtgatcgacgccgccgattacaccgtgttctcgaccaaccacgagcagggc
atgcatgacatcgccaagcacccggtctacccgggcttccactcgatgccgcttgtcgaa
gtcagcatgaacaaaacgacgtgggaatctcttcctgccgacattcaggccacgctggag
cagagcgtatccgattttgcccgccggcaggtaagcacccttgcagagcgcgacgcggtc
gcggttgcagcggctgctgcggacggggtcacggttcatgattggtcggcagaagagcgt
gcccgtttccgggcaattgcaaaaggcgagtgggaagctgccgccggtgcctccgatgca
tccgcgcgggtgtatagcacgctgaccaaatacctcagcgacaacggcttgctggaataa
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