Ruegeria pomeroyi: SPOA0336
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Entry
SPOA0336 CDS
T00215
Name
(GenBank) transcriptional regulator, LacI family
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sil03000
]
SPOA0336
Transcription factors [BR:
sil03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SPOA0336
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_35
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AAV97468
UniProt:
Q5LKP5
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Position
megaplasmid:377348..378382
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AA seq
344 aa
AA seq
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MRKAEKKSSITLVDVAREAGVSAITVSRVIRTPHVVSERSRRKVEAAVEKLGYVPDAAAS
ALASNRTDVIGLLIPSLTNSVFSDVLRGMYDEAENHPFSIQIGNFRYRPLTEEMLIGKFL
RQKPAGLIVAGLDQTDISKGMLRAADCPVIQIMDYDASAEGDMIGFSHYEAGAAAARHLR
DRGYRRIGFLGARMDPRTQRRLAGFNDALNGTDDPQQSKRVIVTSTASSVSLGAELLREL
LVRAPDSDAIFCNNDDLAIGALLEAQRRGIRIPEDFGICGFNDLEMSKQMNPGLTSIATP
RYEIGRLAISTIVDALSSDKASDPTRIDLGFTVVMRGSSARAVD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagcagagaaaaaaagcagcattacgctcgtagatgtcgctagggaagccggt
gttagcgcgatcacagtatcgcgcgtgatacgcacacctcacgttgtttccgagaggtca
aggcggaaggtggaagccgccgttgaaaagctgggctacgtccccgatgcggccgcctcg
gcgctggcgtcaaaccgcaccgacgtgatcggattgttgatcccatcccttacaaacagc
gttttctctgatgttctccgcggcatgtatgacgaagcggaaaatcaccccttttccata
cagataggtaactttcggtaccgccccctcaccgaagagatgctcatcggaaagttcctg
cgtcaaaaacctgccgggctcatcgtggcagggctggaccagaccgacatctccaaaggc
atgctaagagcagccgactgcccggtcatccagatcatggattatgacgcctccgcagaa
ggagatatgatcggtttttcgcactacgaagcgggtgctgcggccgcgcgtcacctgaga
gatcgggggtaccggagaatcggttttcttggggcgcggatggacccgcgaacgcaacgg
cgcctggccggtttcaatgacgcgctgaatggcacggacgatccgcaacaatcaaagcgg
gtgattgtcacctccaccgcgtcatcggtgagcctgggggcagagttgttgcgcgaactt
ctcgtgcgcgccccggattcagatgcgatcttctgcaacaacgacgacctggcaattggc
gcgcttctggaagcgcaaagacgcgggatcaggataccggaagacttcggaatctgcggc
ttcaacgaccttgaaatgagcaaacagatgaaccccggcctgacgtcgatcgcaacgccg
cgctatgagatcgggcgtctggcgatcagtaccatcgtagacgctctttcctcggacaaa
gccagtgatccgacacgaattgaccttggcttcacggtcgtcatgcgtggttccagcgcc
cgggcggtggattaa
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