Ruegeria pomeroyi: SPOA0338
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Entry
SPOA0338 CDS
T00215
Name
(GenBank) transcriptional regulator, LysR family
Organism
sil
Ruegeria pomeroyi
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_8
NUMOD1
HTH_11
HTH_23
MarR_2
Fe_dep_repress
HTH_29
DUF2089
Capsid-VNN
Motif
Other DBs
NCBI-ProteinID:
AAV97470
UniProt:
Q5LKP3
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Position
megaplasmid:381777..382751
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AA seq
324 aa
AA seq
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MDLRKLDLNLLVTFEAIYTAGNISHAAKRLNVSQPTISNALARLRDTVGDPLFIRSGRGV
APTPRATGMIGPVRDALQMIQSGFGDDERFDPSTTRRNFRIVVLDMLEPILMPPLVRAVQ
DYRSVTLEMLPVMDFPIAEGLNDGSLDLALTTFDPQHGDIECEQVGAAKIVIVARKGHPR
IKGEMTPALVSEIGHVALIPKIRALSRVDEVLRYAKIDRHIVYMVTRFWSFPHILANSDL
IAMMPGDFAAHAALFYPLDIFPVPFEFPEQHIYMIWKKRHGLDPGHTWLREKIVEAYRES
EARPPGARASVPGAPRPSDFGQTN
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
gtggacttgcgaaaactggatttgaacctgctggtaacgttcgaggcgatctatacagcc
ggcaatatctcacacgcagcgaagcggctgaatgtaagccaaccgaccatatccaatgcg
ctggccaggttgcgcgatacggtaggtgaccccctgttcatacgcagcgggcgcggtgtc
gcgccgacgccacgtgccactggcatgatcggcccggtgcgcgatgccttgcagatgatc
cagagcgggtttggcgatgacgaaagatttgacccgtcaacgacgcgccgcaatttccgc
atcgtggtgctggacatgctggaaccgatcctaatgccgccgctggtacgcgcggtgcag
gattatcggtcggtcacacttgagatgctgccggtgatggattttcccatcgccgagggg
ttgaacgatggcagtcttgatctggcgctcacaacctttgatccgcagcatggcgatatc
gagtgcgagcaggtgggagcggccaagatcgtcatcgtggcgcgcaaggggcatccgcgg
atcaagggcgaaatgaccccggcgctggtgtctgaaatcggacatgtggcgttgatccca
aaaattcgcgcgctgtcacgggtggatgaggtgctgcgctatgccaagatcgatcgtcac
atcgtctacatggtgaccaggttctggtcattcccccatatccttgcaaactccgatctg
attgccatgatgcctggagatttcgcagcccatgcggcattgttctatccgctggatatc
tttcccgtcccattcgagttccccgagcagcatatctatatgatctggaaaaagcgtcac
gggcttgatcccgggcatacatggctgcgcgagaaaattgtcgaagcctaccgcgagagc
gaggcacggcccccaggcgcacgcgcttcggtaccgggcgcgcctcggccaagcgatttt
gggcaaacgaattga
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