Ruegeria pomeroyi: SPOA0379
Help
Entry
SPOA0379 CDS
T00215
Name
(GenBank) transcriptional regulator, GntR family
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
sil
Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sil03000
]
SPOA0379
Transcription factors [BR:
sil03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SPOA0379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_36
HTH_41
HTH_29
HTH_24
HTH_11
HTH_50
HTH_Crp_2
HTH_AsnC-type
DIP2311-like_C
MarR
MarR_2
TrmB
NirdL-like_HTH
E3_UFM1_ligase
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AAV97511
UniProt:
Q5LKK2
LinkDB
All DBs
Position
megaplasmid:425152..426624
Genome browser
AA seq
490 aa
AA seq
DB search
MKHAAGALLSSIRLDRTLRRSVSVQLYMALRDMILSGALRAGERLPATRTLAKEVGVSRT
TVIDAIDRLVAEGMLVSRIGAGTYVSETLENQHLTTPPSEGAGGRQPRLSYVISHAEPAY
ARRAWLPHKPRAFVTALPALDAFPMAHWARLSARHLRGGRGDVMGYGQPKGLAALRRAIA
THLSALKGIRCHPEQVFITSGAQHAFSLIGRLLLNPGDRVWMENPGASGARNALLSEGAE
LVPVDVDGQGMVVSDGLAKAPHFRLAFVTPSHQQPLGHVMSLPRRLELLQAAEQAQALII
EDDYDGEFYFGNAPRPALHSIDANGRVLYVGTFSKSLFPSLRLGFVLVPERMVAAFDGMF
NTWASGPSTATQAIVAEFMDEGHFATHIRLMRQLYKARYEALLEAARGLPESIGLQETTS
GFHTPAFLAPGVDEAEVVAQAAQQGVTLAPLARYCLSPIPQTGLVFGFGCATPEDIARGM
GILRDLPVLR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacatgccgccggagccttgttgtcctcgatccggctggaccgaacgctgaggcgc
agtgtcagcgtacagctctacatggcgctgcgcgacatgatcctgtccggcgcgctgcgc
gccggtgagcggctgcctgcaacccggaccctggccaaggaggtgggcgtgtcgcgcacc
acggtgatcgacgcgattgaccggctggtcgccgagggcatgctggtgtcgcgcatcggg
gccgggacctatgtcagcgagacgctggagaaccagcatctgaccaccccacccagcgag
ggcgccggcggtcgtcagcccaggctgtcctatgtgatcagccatgccgaacccgcctat
gcacggcgcgcctggctgccgcacaagccgcgcgcctttgtcaccgcgctgccggcgctc
gatgcctttccgatggcgcattgggcacggctgtcggcgcggcacctgcgcggcgggcgc
ggcgatgtcatgggctatggccagcccaaggggttggccgcgctgcgccgggcgattgcc
acccatctgagcgcgctcaagggcatccgctgtcaccccgaacaggtgttcatcacctcg
ggtgcgcaacatgcgttttcgctgatcgggcggctcttgctcaatccgggcgaccgggtc
tggatggagaaccccggcgcctcgggcgcgcgcaatgcgctgttgtccgaaggggccgag
ctggtgccggtggatgtggatgggcagggcatggtggtgtctgacgggctggccaaggcg
ccgcatttccggctggcctttgtcacgccctcgcaccagcagccgctgggccatgtcatg
tcgctgccccgacggctggagctgttgcaggccgccgaacaggcgcaggcgctgatcatc
gaggatgattacgacggcgagttctatttcggcaacgcgccgcgcccggcgctgcacagt
atcgacgccaatgggcgggttctgtatgtcgggacattctcgaaatcgctgttcccatcg
ctgcggctgggctttgtgctggtgcccgagcggatggtcgcggcctttgatggcatgttc
aacacctgggccagcggaccgtcgaccgcgacacaggcgatcgtggccgagttcatggac
gaggggcatttcgccacccatatccggctgatgcgccagctttacaaggcgcgttacgag
gccttgctggaggccgcgcgcggcctgcccgagagcatcggcctgcaagagacgaccagc
gggtttcacacacccgcctttctggcccccggcgttgacgaggccgaggtggtggcgcag
gcggcgcagcagggggtgaccctggctccgctggcgcggtactgcctgtcgccgatcccg
caaaccggtcttgtctttggctttggctgcgccacgcccgaggatatcgcgcgggggatg
ggcattctgcgcgatttgccggtgctgcgctag
DBGET
integrated database retrieval system
