Ruegeria pomeroyi: SPOA0424
Help
Entry
SPOA0424 CDS
T00215
Symbol
fabJ-2
Name
(GenBank) fatty oxidation complex, alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00071
Fatty acid degradation
sil00280
Valine, leucine and isoleucine degradation
sil00310
Lysine degradation
sil00362
Benzoate degradation
sil00380
Tryptophan metabolism
sil00410
beta-Alanine metabolism
sil00640
Propanoate metabolism
sil00650
Butanoate metabolism
sil00907
Pinene, camphor and geraniol degradation
sil00930
Caprolactam degradation
sil01100
Metabolic pathways
sil01110
Biosynthesis of secondary metabolites
sil01120
Microbial metabolism in diverse environments
sil01200
Carbon metabolism
sil01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SPOA0424 (fabJ-2)
00650 Butanoate metabolism
SPOA0424 (fabJ-2)
09103 Lipid metabolism
00071 Fatty acid degradation
SPOA0424 (fabJ-2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SPOA0424 (fabJ-2)
00310 Lysine degradation
SPOA0424 (fabJ-2)
00380 Tryptophan metabolism
SPOA0424 (fabJ-2)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SPOA0424 (fabJ-2)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SPOA0424 (fabJ-2)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SPOA0424 (fabJ-2)
00930 Caprolactam degradation
SPOA0424 (fabJ-2)
Enzymes [BR:
sil01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SPOA0424 (fabJ-2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SPOA0424 (fabJ-2)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SPOA0424 (fabJ-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
DUF1731
NAD_binding_2
F420_oxidored
DprA_WH
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
AAV97555
RoseoBase_p:
fabJ-2
UniProt:
Q5LKF7
LinkDB
All DBs
Position
megaplasmid:complement(469613..471757)
Genome browser
AA seq
714 aa
AA seq
DB search
MGDFHYAKDADGIVTVTMNMDGPVNAMNAEFWPLFAATMDRIEAEPELKGVIWTSAKDTF
FAGGDLKMLKSIEPDGVEALFRSVEATKAVMRRMEKQPVPHVAAINGAALGGGFEICLAC
NHRIAADNPKTKIGLPEVTLGLLPGGGGTVRLTWLLGLEGAMPFLLEGRQVSPDKALKAG
LIHQVVPADQLLTRAKEYILSVQGDAAAVTQPWDTKGYKIPGGPSTAPHNMTRIAGAAAM
LFKKTRGLMPAPTRILDIMTEAAGKVDFDTATRYESRRFVSLTPLASTKNMIETLFFGMN
KVNGGASRPKGVPTSKVQRLGILGAGMMGQGIAFSAATAGLPVVLKDQTLEAAERGKAYT
ATLLDKRVKQGRMSAEEREAVLALITPTDKADDLKGCDLIIEAVFEKIDIKDAVLAEHEA
LLAENGIWGSNTSTLPITRLATGATRPENFVGLHFFSPVDKMPLLEIIAGEKTSDETLAR
AFDFARQIRKTPIIVGDSTGFYTSRTIGTKIIEAVELVAEGHDPLRVDNLSRLTGMPTGM
LSLLDEVQIKLVTDIYNTQVEMGLLDPDKEQNPAARAMLAEMISQHGRHGRATGKGFYDY
DGQGKTIWPGLAAWRKEGADIPDADIKDRILFRAVLESLRCLEEGVLRTVEDGNIGSILG
IGAPVHTGGYLQYVNTYGPARFLARCEELAGKYGDRFAPPEILRTHVAEGRALA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattttcactacgcaaaggatgccgatggcatcgtcaccgtgaccatgaacatg
gacgggccggtcaacgcgatgaatgccgagttctggccgctgtttgccgcgaccatggac
cggatcgaggcggagccggagctgaaaggcgtgatctggacctcggccaaggacacgttc
tttgccgggggcgacctgaagatgctgaaaagcatcgagcccgacggggtcgaggcgctt
ttccgatccgtcgaggcgaccaaggccgtgatgcggcggatggagaagcagcctgtgccc
catgtcgccgcgatcaatggcgccgcacttgggggcgggttcgagatctgtctggcctgc
aaccaccgcatcgccgccgacaatccaaaaaccaagatcggcctgccagaggtcacgctg
ggcctgctgcccggcggtggcggcactgtgcggttgacctggcttctgggtctggaaggc
gcgatgcccttcctgctcgaagggcgacaggtgtccccagacaaggcgctcaaggccggg
ctgatccatcaggtggtgcccgcagatcaactcctgacccgtgccaaggaatacatcctg
tcggtgcagggggatgcggcggcggtgactcagccctgggataccaagggttacaagatc
cccggcgggccatcgaccgcgccccataacatgacccgtatcgcgggcgccgccgcaatg
ctgttcaagaagacacgcgggctgatgcctgcgcccacgcgtatcctcgacatcatgacc
gaggcagcgggcaaggtcgatttcgacaccgccacgcgctatgaaagccgccgtttcgtc
tcactgaccccgctggcgagcaccaagaacatgatcgaaacgctgtttttcggcatgaac
aaggtcaatggcggcgccagccggcccaagggcgtgccgacctccaaggtgcagcgcctg
ggcattctgggcgcgggcatgatgggtcagggcatcgccttttcagcggccacggcaggg
ctgcccgtggtgctcaaggaccagacgctagaggcggccgagcgtggcaaggcctatacc
gccaccctgctcgacaagcgggtcaaacagggccggatgagcgccgaggagcgcgaggcg
gtgctggccttgatcacgccgaccgacaaggccgacgacctgaaaggctgcgacctgatc
atcgaggcggtgttcgaaaagatcgacatcaaggatgcggttctggccgagcatgaggcg
ctgctcgctgaaaacggcatctgggggtccaatacctcgaccctgccgatcacgcggctg
gccacgggcgccacacggcccgagaacttcgtcggtctgcatttcttctcacccgtcgac
aagatgccgctgttggagatcatcgcgggcgagaagacctcggacgagacgctggcgcgc
gccttcgactttgcccgccagatccgcaagaccccgatcatcgtgggtgacagcacgggg
ttctatacctcgcgcaccatcggcaccaagatcatcgaggcggtggaactggtggccgaa
ggccacgacccgctgcgcgtcgacaacctgtcgcgcctcaccggcatgcccaccggcatg
ctgtcgctgcttgacgaggtgcagatcaagctggtgaccgatatctacaacacccaggtg
gaaatgggcctcttggaccctgacaaggaacagaacccggccgcccgcgccatgctggcc
gagatgatcagccagcacggccgccatggccgcgccaccggcaaggggttctatgactat
gacggacagggcaagacgatctggccgggactggccgcctggcgcaaggagggggccgac
attccagacgcggatatcaaggaccgcatcctgttccgcgccgtgctggaaagcctgcgc
tgtctggaggaaggcgtgctgcgcacggtcgaggatggcaatatcggctcgatccttggg
atcggcgcgccggttcataccggcggctatctgcaatatgtgaacacctacggcccggcg
cggttcctggcccggtgcgaggagctggcgggcaaatacggagaccggttcgccccaccc
gagatcctcagaacacatgtcgccgagggccgcgccctggcctga
DBGET
integrated database retrieval system
