Saccharolobus islandicus M.16.27: M1627_0065
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Entry
M1627_0065 CDS
T00900
Name
(GenBank) protein of unknown function DUF87
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sim
Saccharolobus islandicus M.16.27
Brite
KEGG Orthology (KO) [BR:
sim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sim03400
]
M1627_0065
DNA repair and recombination proteins [BR:
sim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
M1627_0065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
TrwB_AAD_bind
AAA_10
FtsK_SpoIIIE
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACP54094
UniProt:
C3N0D3
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All DBs
Position
complement(56660..58162)
Genome browser
AA seq
500 aa
AA seq
DB search
MIIGYVIGQATTQEALILAERPVRLGTYVVLEYDNVKALGLITNVTRGSPMLDDNMNDIE
IVQRLKQFNNSIPVYTKAKVKMLCDMNNHFLMPDIPPFAGTPAREAEDEELKSIYSQDGQ
IRIGSLIGKNVEVKLNINSFARHLAILAATGSGKSNTVAVLSQRISELGGSVLIFDYHGE
YYDSDIKNLNRIEPKLNPLYMTPREFSTLLEIRENAIIQYRILRRAFIKVTNEIREKLKE
GQIPFSTLNSQFYELMRDELETQGNSDKKSSAKDEVLNKFEEFMDRYSNVIDLTSSDIIE
KVKRGKVNVVSLTQLDEDSMDAVVSHYLRRILDSRKDFKRSKSSGLKFPIIAVIEEAHVF
LSKNENTLTKYWASRIAREGRKFGVGLTIVSQRPKGLDENILSQMTNKIILKIIEPTDKK
YILESSDNLSEDLAEQLSSLDVGEAIIIGKIVKLPAVVKIDMFEGKLLGSDPDMIGEWKR
AEENERIAKGFADFGTEIGD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgataattggttatgtaattggtcaagctacaacacaagaggctttgatactagctgaa
aggccagttagattaggaacttatgttgttctagaatatgataacgttaaggcccttgga
ctaataacaaacgtgactagaggtagccctatgctagatgataatatgaatgatatagaa
atcgttcaaagattaaaacaattcaacaatagcatacccgtttatacaaaggctaaagta
aaaatgttatgtgatatgaataatcactttttaatgcccgatatacccccgttcgctgga
accccagctagagaggctgaagacgaggagttaaaaagtatttattcgcaagatggccaa
attagaataggaagcttaataggtaaaaacgtggaggttaaattaaatataaattccttt
gcaagacatttagctattttagcagctactggttctgggaagtcaaatacagtagcagtt
ctttctcaaagaatttctgaacttggtggatctgttcttatctttgattatcatggagag
tactatgatagcgatataaagaatctaaatcgtattgaacctaaacttaaccctctttat
atgaccccaagggaattttctacgttactagaaataagagagaatgcaattatacagtac
agaattttaagaagagctttcataaaggtaacaaatgagataagagaaaagctaaaagaa
ggacaaataccattttctactctaaatagccaattttatgaactaatgagagacgaattg
gaaactcaaggaaatagtgataaaaagagtagtgcaaaggatgaggtactgaataagttt
gaagaattcatggataggtattcaaacgtcattgatcttacatcttcagatataattgaa
aaagtaaagagaggtaaggtaaacgttgtaagcctaacacaattagatgaagactcaatg
gatgcagtagtctcacattatttaagaagaatccttgattctaggaaagattttaaaaga
agcaaaagtagtggccttaaattcccaataatagccgtaatagaagaagctcacgttttc
ttgtctaaaaacgagaatacattaaccaagtactgggcgtccaggatagcaagagagggc
agaaaattcggagttggattaacaatagtaagtcaaaggcctaaaggcctagatgaaaat
atattaagtcaaatgacaaacaagatcattttaaagataattgaacctactgataaaaaa
tacatcttagagtcaagtgataatctaagcgaagatttagctgaacaactgtcctccttg
gacgttggtgaggctataattataggtaaaatagtaaaattacctgcagttgtgaagata
gatatgtttgaaggaaaattgcttggatcagaccccgacatgataggggaatggaagaga
gcagaagaaaatgaaagaatagctaaaggctttgccgactttggaacggaaattggtgat
tga
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