KEGG   Saccharolobus islandicus M.16.27: M1627_1238
Entry
M1627_1238        CDS       T00900                                 
Name
(GenBank) proliferating cell nuclear antigen PcnA
  KO
K04802  proliferating cell nuclear antigen
Organism
sim  Saccharolobus islandicus M.16.27
Pathway
sim03030  DNA replication
sim03410  Base excision repair
sim03420  Nucleotide excision repair
sim03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M1627_1238
   03410 Base excision repair
    M1627_1238
   03420 Nucleotide excision repair
    M1627_1238
   03430 Mismatch repair
    M1627_1238
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sim03032]
    M1627_1238
   03400 DNA repair and recombination proteins [BR:sim03400]
    M1627_1238
DNA replication proteins [BR:sim03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    M1627_1238
DNA repair and recombination proteins [BR:sim03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     M1627_1238
   MMR (mismatch excision repair)
    Other MMR factors
     M1627_1238
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    M1627_1238
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad1
Other DBs
NCBI-ProteinID: ACP55125
UniProt: C3N550
LinkDB
Position
complement(1200986..1201723)
AA seq 245 aa
MKAKVIDAVSFSYILRTVGDFLSEANFIVTKEGMRVSGIDPSRVVFLDVFLPSSYFEGFE
VNQDKEIIGFKLEDVNDVLKRVLKDDTLILSSNESRLTLTFDGEFTRSFELPLIQVETTQ
PPSVNLEFPFKAQLLTVTFADIIDELSDLGEVLNIYSRENKLYFEVFGDLATSRVELSTD
SGTLLEASGADVNSSYGMEYVVKTTKMRRASDSMELYFGSQIPLKLRFKLPQEGYGDFYI
APRAE
NT seq 738 nt   +upstreamnt  +downstreamnt
atgaaagctaaggtaattgatgctgtttcattctcttatattttgaggactgtgggagat
tttctgagtgaagctaactttattgtaactaaagagggtatgcgagtcagtgggattgac
ccttcaagagtagtttttctagacgtatttttaccgtcaagttactttgagggatttgaa
gttaatcaagataaggaaataataggttttaagttagaagacgtaaatgatgtgctaaaa
cgcgtgttaaaggacgatacattaatactctcttcgaacgaatccaggttaacacttact
tttgatggagaattcactagatcttttgaacttccattaattcaagttgaaactacacag
ccaccttcagttaatttagagtttccatttaaggcacaactacttactgtaacttttgcg
gacataattgatgaattatctgatttaggtgaagttttgaatatatattccagggagaat
aaactttattttgaagtttttggggacctcgccacctcaagagtagagttgtcaacggat
agtgggacgttattagaagcttcgggtgcagatgtcaatagtagttatggaatggaatac
gttgtgaagaccactaaaatgagaagagcttccgattcaatggaattatatttcggttct
caaatacctttgaaacttagatttaaattaccgcaagaaggatatggggacttttacatt
gcaccaagggcagagtaa

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