Saccharolobus islandicus M.16.27: M1627_1245
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Entry
M1627_1245 CDS
T00900
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sim
Saccharolobus islandicus M.16.27
Brite
KEGG Orthology (KO) [BR:
sim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sim03016
]
M1627_1245
Enzymes [BR:
sim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
M1627_1245
Transfer RNA biogenesis [BR:
sim03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
M1627_1245
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
ACP55132
UniProt:
C3N557
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All DBs
Position
1206278..1206862
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AA seq
194 aa
AA seq
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MRLFIGIEVPQSPKLLEIFEIVKNTGADIKLVEPYNIHITLLFLGEVRDDRVEEVKDSMS
GLKFNKFKVTLKGLGAFPNLTRPRVVWVGIVEGQQQLRQIRSYILNELLKRKIRPEDDKD
FSPHLTIGRVKSYNSISNLINTINENMNVDIGTFEVNNVVLFKSTLTPKGPIYDKLFEVS
SIDRGGSTEDNKTH
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaggctctttataggcatagaagtaccgcaatccccaaaactgcttgaaatattcgag
atagtaaaaaatacaggagccgacataaaattggtcgaaccatataacattcacattaca
ctattattcctaggcgaagttagggatgatagagtagaagaagtgaaagattcaatgagt
gggttaaaattcaataaatttaaagttacactaaaaggtttaggggcatttccaaattta
acaagaccaagagtagtttgggttggaatcgttgagggccaacaacagcttagacagatt
agatcttatatacttaacgagctattaaagcgaaaaattagaccagaagacgataaggat
ttctcaccacatttaacaataggcagggtaaaaagctacaactccattagcaacctcata
aatacgattaacgagaatatgaacgtggatattggaacctttgaagttaataatgttgtt
ctctttaaaagcacgttaactccaaaaggtccaatatatgataaactgtttgaagtgagt
tcaattgatagaggaggaagtactgaagataataaaacccactga
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