Saccharolobus islandicus M.16.27: M1627_1456
Help
Entry
M1627_1456 CDS
T00900
Name
(GenBank) exosome complex exonuclease 1
KO
K11600
exosome complex component RRP41
Organism
sim
Saccharolobus islandicus M.16.27
Pathway
sim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M1627_1456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sim03019
]
M1627_1456
Messenger RNA biogenesis [BR:
sim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
M1627_1456
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
M1627_1456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ACP55338
UniProt:
C3N5R3
LinkDB
All DBs
Position
1406371..1407108
Genome browser
AA seq
245 aa
AA seq
DB search
MLQVERPKLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKE
MHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRT
AIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIVLDLNEAEDM
WGEADMPVAMMPSLNQVTLFQLNGNMTPEEFRQAFDLAVKGINIIYNLEREALKSKYVEF
KEEGV
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaagtggagagaccaaaactaatccttgaagatggaaagcgaatagatggtaga
aagccagatgaattaaggagtataaagatagaattgggagttctcaaaaacgctgatggt
tcagcgatttttgagatgggaaatacaaaggctatagcagcggtttacggtccaaaagaa
atgcatccaagacacttatctcttccggatagggcagtattaagagttagatatcatatg
acaccattctctacagacgagcgaaagaatcccgcacctagtagaagagagattgagctt
tctaaggttataagagaagctttagaatcagctgttttagtggaattgtttccaagaact
gccatagatgtttttactgaaatattacaagcagacgcgggatccagattagtttcattg
atggctgcgtctttggcgttagctgatgctggaattcctatgagagatttaatagctggg
gtagctgtagggaaggctgatggagtaatagttctagatttaaatgaagccgaggatatg
tggggagaggctgatatgccggttgcaatgatgccttctttaaaccaggtgacgttattt
cagttaaatggtaatatgactccggaggaatttaggcaagcttttgatttagcagttaag
ggtataaatataatatataatttagagagggaggctctaaaaagtaagtatgtagagttt
aaagaagagggtgtatag
DBGET
integrated database retrieval system
