Saccharolobus islandicus M.16.27: M1627_1543
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Entry
M1627_1543 CDS
T00900
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sim
Saccharolobus islandicus M.16.27
Pathway
sim03022
Basal transcription factors
sim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M1627_1543
09124 Replication and repair
03420 Nucleotide excision repair
M1627_1543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sim03021
]
M1627_1543
03036 Chromosome and associated proteins [BR:
sim03036
]
M1627_1543
03400 DNA repair and recombination proteins [BR:
sim03400
]
M1627_1543
Enzymes [BR:
sim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
M1627_1543
Transcription machinery [BR:
sim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
M1627_1543
Chromosome and associated proteins [BR:
sim03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
M1627_1543
DNA repair and recombination proteins [BR:
sim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
M1627_1543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPD_arch
Helicase_C_2
DEAD_2
ResIII
nSTAND3
DUF5886
SLFN-g3_helicase
TsaE
Motif
Other DBs
NCBI-ProteinID:
ACP55426
UniProt:
C3N601
LinkDB
All DBs
Position
1463418..1465031
Genome browser
AA seq
537 aa
AA seq
DB search
MEITLREWQRQKFDEALNALKTKKTLLLNVTTGAGKTLFTLMLGKVLHKKILFLTRTHSE
FEAVRREAERLGLKVAYLFGKNSVCPYATDDVKPEDIECRECSLRDKIKDLSGLRPSQIL
QLSKDASDYCPYHSLRALISKADVIVASYMYFFNPFLRRKIVCSSPDCVKPEELLVIVDE
AHNLISADEWFSKKIGKKSVSNTLKELEMVEVNTNNDLTDAKRFLGELGRFLDNITDEGG
CRELPLYPKPSDEALLQIHRASLSYLNMVKGPIKRSYLRSIYDFFNTEGEMFNCNGRLTV
VPSNTLEMIKSSFNFADMRVLMSGTLPNLGLEGYRISVEVRLGRAEYYYCNSVNSRVKYR
RANAEKYAEIIRKVYNDSSSSVLVFFPSYDFKSEVKKCLNGLPTLEESKRVAHEEILELM
KGGKYAVLLVMRAKESEGVEFRDENNRNLFSDMILAGLPYPDITDALVRRRIRKLSEETN
RSEEEVAHELTLITIKQTIGRAFRDPNDYVKVYLCDSRYKEYFSDLGLTEKEIKLFV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaaataactttgagggaatggcagaggcagaaattcgatgaggcattaaacgcatta
aagaccaaaaagacgctattgcttaacgtaactaccggagccggaaagacgttatttacg
ctcatgctagggaaagtactgcataagaagatcttattcctcaccagaacacatagcgaa
tttgaggctgtgaggagggaagcggaaaggttagggcttaaagtggcctacctcttcggc
aagaactcggtatgcccttatgctactgacgacgttaaacccgaagacatagagtgcaga
gaatgttcattaagggataaaattaaggacctaagcggattaaggccatctcagatactc
cagttaagtaaggacgcttcagactattgcccctaccactctttaagggctttaataagc
aaggctgacgtaatagtagcttcctacatgtacttcttcaaccccttccttaggaggaag
atagtgtgcagttccccagattgcgttaagcccgaggaacttttagtgatcgtggatgag
gctcataacctaatttccgctgacgagtggttctctaaaaagataggtaagaagagtgtg
agtaacaccttaaaggaacttgagatggtggaagttaatactaataacgatttaacagac
gctaagaggttcctcggagaattgggtaggtttttagataacataaccgatgagggaggt
tgcagagaattgccgttatatcctaaaccttcagacgaagccttactgcaaatacataga
gcttccttatcctatcttaacatggtaaagggccctattaagaggtcgtatttgaggtcc
atatacgatttcttcaatacggaaggggagatgttcaactgtaacgggaggcttactgta
gtcccttcgaatactctagaaatgataaagagttctttcaattttgcggatatgagggtg
ttgatgagcggtacattgcccaatctgggtttagaagggtataggataagcgttgaagtt
aggttaggtagggctgaatactattactgtaattccgttaattccagagttaagtatagg
agggctaacgccgagaagtatgcggagataataagaaaggtatataatgactcctcttcc
agtgtcttagttttctttcccagctatgattttaaaagtgaggtaaagaagtgccttaac
ggtttgcctacgttagaggagagtaagagagtggcacatgaggaaatcttagagttaatg
aagggtgggaaatacgcagtacttttggttatgagggcaaaggaaagtgaaggtgttgag
tttagagatgagaataataggaatttatttagtgatatgatacttgcaggtttaccttat
ccagatattactgatgctttagttaggaggaggattagaaagctctcagaggaaactaat
aggagtgaggaggaagtagctcatgaacttacgttaattactataaaacagactatcggt
agggcttttagggatcccaacgactatgtaaaagtatatttatgcgatagtcgttataag
gagtacttttctgatttgggattgacggaaaaagagattaagctttttgtttaa
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