Saccharolobus islandicus M.16.27: M1627_1782
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Entry
M1627_1782 CDS
T00900
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
sim
Saccharolobus islandicus M.16.27
Brite
KEGG Orthology (KO) [BR:
sim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sim03016
]
M1627_1782
Enzymes [BR:
sim01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
M1627_1782
Transfer RNA biogenesis [BR:
sim03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
M1627_1782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
ACP55657
UniProt:
C3N6N2
LinkDB
All DBs
Position
1671146..1671694
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AA seq
182 aa
AA seq
DB search
MVKALLVGSKVLIPNVDESRYIYSNGFYGKAIGISKPKGPKDIIRPLELSLIESVYLAKK
GLIKVIDKNGEVLEYEKLYEYSSKIINKFDIMYRVYEDLREKGFIVRSGVKYGADFAVYT
LGPGLEHAPYVVIAVDIDEEITPHELLSFGRVSHSTRKRLVLALVDRKSESVRYIMFKWV
KM
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagccttattggtgggatctaaggtattaatcccaaatgtagatgaatcaaga
tacatttattcaaacggtttctatggaaaggcaataggaatttctaagccgaagggccct
aaagatataattagacctttagaattatcattaattgaaagcgtctatctagccaaaaag
ggtttaattaaagttatcgataaaaatggtgaagttcttgaatatgagaaattatatgaa
tatagttctaaaataataaataaatttgatatcatgtacagagtttacgaagatctgagg
gaaaaaggattcatagttagatctggagtaaagtatggagcagattttgcagtatacacg
ttaggacctggattagaacatgcaccttatgtggttattgcagtggatattgacgaagaa
attactcctcatgagttattgagttttgggagagtctcccacagcacaaggaaaagatta
gtattggctctagtagatcgcaaaagtgaaagtgtgagatacataatgtttaaatgggtc
aaaatgtaa
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