Saccharolobus islandicus M.16.27: M1627_1805
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Entry
M1627_1805 CDS
T00900
Name
(GenBank) DNA-directed RNA polymerase subunit E, RpoE2
KO
K15171
transcription elongation factor SPT4
Organism
sim
Saccharolobus islandicus M.16.27
Pathway
sim03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sim00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
M1627_1805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sim03021
]
M1627_1805
03019 Messenger RNA biogenesis [BR:
sim03019
]
M1627_1805
Transcription machinery [BR:
sim03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
M1627_1805
RNA polymerase I system
M1627_1805
Messenger RNA biogenesis [BR:
sim03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
M1627_1805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Zn_ribbon_3
DZR
Zn_ribbon_RRN7
Zn_ribbon_15
HypA
Zn_Ribbon_1
HVO_0416
RUBY_RBDX
UPF0547
zf-C3HC4_3
DZR_2
NRDD
DUF7129
DUF8122
TackOD1
Zn_Ribbon_TF
Zn_ribbon_GTF2H2
Rtf2
Motif
Other DBs
NCBI-ProteinID:
ACP55680
UniProt:
C3MZ48
LinkDB
All DBs
Position
complement(1690243..1690443)
Genome browser
AA seq
66 aa
AA seq
DB search
MAKKSVFKACKNCKALVETDKETCPVCGSSSFTEEWDGMIIIIDSESEVAKITEAPKPWK
YAIIIK
NT seq
201 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaatcagtttttaaagcatgtaaaaactgtaaggcattagtagagactgac
aaggaaacatgtccagtatgtggcagcagtagctttacagaagagtgggatggtatgatt
attatcattgattcagagtctgaagtagctaaaataactgaggctccaaaaccatggaaa
tacgcgataataataaagtaa
DBGET
integrated database retrieval system
