Saccharolobus islandicus M.16.27: M1627_1878
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Entry
M1627_1878 CDS
T00900
Name
(GenBank) NusG antitermination factor
KO
K15172
transcription elongation factor SPT5
Organism
sim
Saccharolobus islandicus M.16.27
Pathway
sim03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sim00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
M1627_1878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sim03021
]
M1627_1878
03019 Messenger RNA biogenesis [BR:
sim03019
]
M1627_1878
Transcription machinery [BR:
sim03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
M1627_1878
RNA polymerase I system
M1627_1878
Messenger RNA biogenesis [BR:
sim03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
M1627_1878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW2_Spt5
KOW4_SPT5
SH3_KIN17_C
Ribosomal_uL24m-like
Motif
Other DBs
NCBI-ProteinID:
ACP55749
UniProt:
C3MZB7
LinkDB
All DBs
Position
1754979..1755437
Genome browser
AA seq
152 aa
AA seq
DB search
MEKPNMRNYYAVKVVGGQEINVALMLEERIKTNNIKGIYAIIVPPNLKGYVVLEAEGLHI
VKPLIAGIRNARGLAQGLLPRDEILKIVSKKTIGPTVKPGDVVEVISGPFRGTQAQVVRV
EEAKGEVVLNILESAFPLQVTVPLDQIKVSKR
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaccgaatatgagaaattattatgctgtaaaagttgttggagggcaagaaata
aatgtagctttaatgttagaagagagaataaaaactaataatattaaaggaatatatgca
ataattgttccacccaatttgaaaggatatgtagttctggaggcagagggtttgcatata
gttaaaccattaattgctgggataaggaatgcaagaggacttgcacaaggtttactacct
agagatgagatactaaaaattgtatctaagaaaaccataggtccaaccgtaaaacctggg
gatgtagtagaagtaatttctggtccctttaggggtactcaggctcaagtggtaagagtt
gaggaagctaaaggagaggtagtgttaaatattttagaatcagcatttccattacaagtc
acagttcctttagatcaaattaaggtgtctaaaaggtga
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