Saccharolobus islandicus M.16.27: M1627_1907
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Entry
M1627_1907 CDS
T00900
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sim
Saccharolobus islandicus M.16.27
Pathway
sim03022
Basal transcription factors
sim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M1627_1907
09124 Replication and repair
03420 Nucleotide excision repair
M1627_1907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sim03021
]
M1627_1907
03036 Chromosome and associated proteins [BR:
sim03036
]
M1627_1907
03400 DNA repair and recombination proteins [BR:
sim03400
]
M1627_1907
Enzymes [BR:
sim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
M1627_1907
Transcription machinery [BR:
sim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
M1627_1907
Chromosome and associated proteins [BR:
sim03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
M1627_1907
DNA repair and recombination proteins [BR:
sim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
M1627_1907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
PhoH
AAA_34
DpaA_N
Stealth_CR2
TsaE
Motif
Other DBs
NCBI-ProteinID:
ACP55778
UniProt:
C3MZE6
LinkDB
All DBs
Position
complement(1785210..1786862)
Genome browser
AA seq
550 aa
AA seq
DB search
MELREWQSKIAEKIVEALRNNFLVSLQAPTGSGKTLFALYASFKVKPKVVFIVRTHNEFF
PVYRELSLHFKDKKYGFLVGKSSACVFSSSDVDPQDIYCNGCEIFNASTITITDPPKVSL
NRLKEEGKKLGFCPYYSLLESIKSADVVLLTYPYLFIPWLRESLDINWEDYVVVIDEAHN
IENISNIEEKKLNKRIIEMAISQTKSQNVRLILERLKENIEQIIYSEDKYILIEKEKLAS
IIPPNEEIESLAEEYEEVRKNMIKNKTVSRNYLGSILRFFDLVNDERVRVFSYSNSLVVK
YIIPSYFTDILNDEKITYMLMSGTMQPLDYLRNIIGVTRKILYVDAEKVMKNRLTGTYEC
LISIDVTTTYSLRSEQMVRKYASYLLKIFYNSRKHVLAIFPSYEFMRIVSKFLNVRYLAE
DAETNIEEIMSNLKKEKTIIMGIARGKLAEGIEIVENGSSLISDVAMVGIPYPPIDDYLK
IRIEEISKRLKKDISSELIGIQALIAVKQSIGRAIRGPMDSATVWLLDKRYDSLWWKKEL
NCLNARKIKL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtggaacttagagagtggcaaagcaaaatagctgaaaaaattgttgaagcattaagaaat
aattttttagtctcattacaagcacctactggtagcggtaagactctatttgcactctac
gcttctttcaaggttaagccgaaagtggtatttattgtcagaacccataatgagtttttc
ccagtctatagagaactatcactacattttaaagataaaaaatatggatttttagtcggt
aaatcttctgcatgtgtttttagttcttctgacgttgatccccaagatatatattgtaat
ggatgtgaaattttcaatgcatccacaattactataactgatccgccaaaggtaagtctg
aatagactaaaggaggagggtaaaaaattagggttttgcccatactactcgctattggag
agtataaaaagcgctgatgtggtactactcacttatccttatctgtttataccttggctt
agagaatccttagatattaattgggaggactatgttgtcgtgatagatgaggctcataat
atagagaatatttctaatatagaggagaaaaagttaaacaaaagaatcatagagatggca
atttctcaaactaaatcacagaatgtgagattaatattggaaaggctcaaggaaaacata
gaacaaataatttattcagaggataaatatatacttattgaaaaggagaaattagccagc
atcattcctcctaatgaggaaattgagagtctagctgaggaatatgaagaagttagaaag
aatatgataaaaaataagacagtaagtaggaattatcttggttcgattttgaggtttttt
gatttagttaatgatgaaagagttagagttttttcatattcaaattccttggttgtaaaa
tatataataccctcctattttactgatatactaaacgatgaaaaaattacctatatgtta
atgtcaggtactatgcaacccttggattatcttagaaatattataggagttactagaaaa
atattatatgttgatgctgaaaaggttatgaaaaatagattaactgggacatatgagtgt
cttatatctatagatgttacaactacttatagtttaaggtcagagcagatggtacgtaaa
tacgcatcatatttattaaaaattttctataattccagaaagcatgttctagctatattt
cctagctacgagtttatgcgaattgtatctaaatttctaaatgtaagatatttggcagag
gatgcagaaactaatatcgaagagataatgagtaatctgaaaaaagaaaaaacaattata
atgggtatagcaaggggtaagttagctgaaggaattgaaatagttgaaaacggaagtagt
ttgatatcagatgttgcaatggtaggtatcccttatcctccaatagacgattacttaaag
atacgtattgaggagatatcaaaaagactgaaaaaagatatcagtagcgaactaataggc
atacaagcattaattgcggtaaaacaatccataggtagggccatcagaggtccaatggat
agcgcaactgtatggcttctcgataaaagatatgacagtctatggtggaagaaagaactt
aattgcttgaatgcaaggaaaattaaactgtga
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