Saccharolobus islandicus M.16.27: M1627_1939
Help
Entry
M1627_1939 CDS
T00900
Name
(GenBank) tRNA intron endonuclease, catalytic domain protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
sim
Saccharolobus islandicus M.16.27
Brite
KEGG Orthology (KO) [BR:
sim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sim03016
]
M1627_1939
Enzymes [BR:
sim01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
M1627_1939
Transfer RNA biogenesis [BR:
sim03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
M1627_1939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Sen15
SMMA_C
rpo132
COG2_N
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
ACP55810
UniProt:
C3MZH8
LinkDB
All DBs
Position
1813257..1813679
Genome browser
AA seq
140 aa
AA seq
DB search
MKTITFMGNILIFDNVTIMSEKAETTLEKIYLALSSSKQLPSEIIYLVNWDKVDVFVDLK
QRGRVTIDGIDEQSLIIKDKENGKYTAMVLIVDENEKVSFKKILDKLHQSKSMNLELYLS
IVDKYGDVTYYTISEIKMSK
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaataacttttatggggaatatacttatttttgataatgtgactataatgtct
gagaaagctgaaactactttagagaagatatatttagcattaagctcatctaaacagtta
cctagtgagatcatttatcttgtaaattgggataaagttgatgtatttgttgacttaaag
cagagaggaagagttacaattgacggtatagatgaacaatcgcttataataaaggacaag
gaaaatggaaaatatactgctatggttttaatagtagatgaaaatgaaaaggtaagtttt
aagaaaatattagataaactacatcagtcgaaatcaatgaatttagaactttatctttca
attgttgataaatatggggatgtaacatattacacaatatctgagataaaaatgtcaaag
tga
DBGET
integrated database retrieval system
