Saccharolobus islandicus M.16.27: M1627_1996
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Entry
M1627_1996 CDS
T00900
Name
(GenBank) translation elongation factor EF-1, subunit alpha
KO
K03231
elongation factor 1-alpha
Organism
sim
Saccharolobus islandicus M.16.27
Pathway
sim03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
M1627_1996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sim03019
]
M1627_1996
03016 Transfer RNA biogenesis [BR:
sim03016
]
M1627_1996
03012 Translation factors [BR:
sim03012
]
M1627_1996
04131 Membrane trafficking [BR:
sim04131
]
M1627_1996
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sim04147
]
M1627_1996
Messenger RNA biogenesis [BR:
sim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
M1627_1996
Transfer RNA biogenesis [BR:
sim03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
M1627_1996
Translation factors [BR:
sim03012
]
Eukaryotic type
Elongation factors
M1627_1996
Membrane trafficking [BR:
sim04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
M1627_1996
Exosome [BR:
sim04147
]
Exosomal proteins
Proteins found in most exosomes
M1627_1996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
EF-G_D2
Septin
RsgA_GTPase
SLD5_C
HSR
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-ProteinID:
ACP55866
UniProt:
C3MZN4
LinkDB
All DBs
Position
1864513..1865820
Genome browser
AA seq
435 aa
AA seq
DB search
MSQKPHLNLIVIGHIDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLD
RLKEERERGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKG
EYEAGMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFMRSY
GFNTNKVRFVPVVAPSGDNITHKSENMKWYNGPTLEEYLDQLELPPKPVDKPLRIPIQDV
YSISGVGTVPVGRVESGVLKVGDKIVFMPAGKVGEVRSIETHHTKMDKAEPGDNIGFNVR
GVEKKDIKRGDVVGHPNNPPTVADEFTARIIVVWHPTALANGYTPVLHVHTASVACRVSE
LVSKLDPRTGQEAEKNPQFLKQGDVAIVKFKPIKPLCVEKYNEFPPLGRFAMRDMGKTVG
VGIIVDVKPAKVEIK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaagcctcaccttaatttaatagtaataggtcacatcgatcacggtaaaagt
acattagtgggaaggctactaatggatagaggtttcatagacgaaaaaacagtaaaggaa
gcagaagaggctgccaaaaagttaggtaaagaatctgagaagtttgcattcctactagat
agattaaaagaggaaagagaaagaggtgtaacaataaatctaacgttcatgagatttgaa
actaagaaatacttctttacaataattgatgctcctggccatagagacttcgtaaagaac
atgataactggtgcaagccaagcagatgctgcaattctagtagtttctgctaagaaaggt
gaatatgaagctggaatgagcgtagaagggcaaacaagagagcatataattctagccaag
accatgggtctagatcaattaattgtggcagtaaacaaaatggacttaacagaaccaccg
tatgatgaaaaacgttataaggagattgttgatcaagtcagcaaatttatgagaagttat
ggttttaatacaaataaggttagatttgtaccagtagttgcacccagtggcgataatata
actcataaatcagaaaatatgaagtggtataacggtcctaccttggaagagtatttagat
cagctagagttaccaccaaaaccagtagacaaaccattaagaattccaattcaagacgtc
tactctatatccggagtaggtactgtaccagtaggtagagtagaaagtggagtgttaaag
gtcggtgataagatcgtatttatgccagcgggcaaagtaggtgaagttagatccatagag
actcatcatactaagatggataaagcggaaccaggtgacaatattggatttaacgttaga
ggtgttgaaaagaaagatataaagagaggagacgttgtaggtcatccaaataatccacct
actgttgctgatgaattcactgcaagaataatagtagtatggcatcctacggcattggca
aatggttatacaccagtacttcacgttcatactgcaagcgtagcatgtagggtttcagaa
ttagtgtctaaattagatccgagaactggtcaagaggcagaaaagaacccacagttccta
aaacaaggagatgtagcaatagtcaaatttaaaccaatcaaaccattatgtgtagagaag
tataatgagtttccaccactaggcagattcgcaatgagagatatgggtaagactgttgga
gtcggtataattgttgatgtaaaaccagccaaagtagaaatcaaataa
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