Saccharolobus islandicus M.16.27: M1627_2041
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Entry
M1627_2041 CDS
T00900
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sim
Saccharolobus islandicus M.16.27
Brite
KEGG Orthology (KO) [BR:
sim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sim03016
]
M1627_2041
Enzymes [BR:
sim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
M1627_2041
Transfer RNA biogenesis [BR:
sim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M1627_2041
Prokaryotic type
M1627_2041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ACP55910
UniProt:
C3MZS8
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All DBs
Position
1905703..1906836
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AA seq
377 aa
AA seq
DB search
MIPHEIDIALGMERYYYEDWNEIDGTIERPNGFKVVEEIDFKPAHEWKGEEKGKYAVYLL
TKWGIDHFSVLSEIQKVLHSKVNYMGIKDASAITSQLVYITLTKKQELINEYKSNSFILK
FLGYSSMKFNHTGNIFEISLSTSNFDLVVERVRQIEKNPYLPAFIGYQRFGTRRPVTHLI
GKYLLKRDWEKAFYLILTYPFLSESKEIIEIRKLIIKGDFNEAVRLIPSKFKQEKLLLKN
YMKFNSYYLALKNSFIPISLYLDAYQSYLFNMYLSRRLDKYKNSDDKDNLFIRIPIYFND
CDDICKEIYLNEEIEKNFFKLPEFKISLKSLNRKAFMNIRNLKINEETRTISFVLDRGMY
ATVLLREILRGDPRKFT
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtgatccctcatgaaatagacattgcgttaggtatggaaagatattactatgaagattgg
aacgagatagacggaacaatcgaaagaccaaatggatttaaagttgtagaagagattgac
tttaagccagctcacgagtggaaaggtgaggaaaaaggtaaatatgcagtttacttgctc
acaaaatggggaatagatcatttttccgttttatctgaaattcagaaagtactacattcg
aaagtgaattatatgggtattaaggatgctagcgccataacctctcagttagtgtatata
acgttaaccaaaaaacaagaattgattaatgagtataaatctaatagttttattctaaag
tttcttggatattcttcaatgaagtttaatcataccgggaatatatttgaaatatctttg
tcaacgtcaaatttcgatttagtcgtagaaagagtgagacaaattgagaaaaatccatat
ctccccgcttttataggttatcaacgttttggtactcgtaggcctgtcacacatttaata
ggtaaatatctattgaaaagagactgggaaaaagcattctatttgattttgacgtatcct
tttctttctgaatcaaaagagattattgaaattagaaagctaataataaaaggtgatttt
aatgaagcagttagattgattccgtctaagtttaaacaagagaaactattattgaaaaac
tacatgaaatttaattcttattacctagctcttaaaaatagtttcattccaatctcgtta
tatttagatgcatatcaaagttatttatttaacatgtatttatccagaaggttagacaag
tataagaactcagatgataaggataatttatttataagaattcctatctattttaatgac
tgtgatgatatttgcaaggagatttatctgaatgaagaaatagaaaagaatttttttaaa
ttaccagaatttaaaatttcactaaaaagcctcaatagaaaggcatttatgaatataaga
aatttaaaaattaacgaggaaacaagaacaatatcttttgtattagatagggggatgtac
gctacagtattacttagggaaattttaagaggagatccaagaaaattcacttaa
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