Simplicispira suum: C6571_03130
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Entry
C6571_03130 CDS
T05361
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
simp
Simplicispira suum
Pathway
simp03420
Nucleotide excision repair
simp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
simp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C6571_03130
03430 Mismatch repair
C6571_03130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
simp03400
]
C6571_03130
Enzymes [BR:
simp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6571_03130
DNA repair and recombination proteins [BR:
simp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6571_03130
MMR (mismatch excision repair)
Other MMR factors
C6571_03130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AVO40407
UniProt:
A0A2S0MX76
LinkDB
All DBs
Position
complement(656413..658866)
Genome browser
AA seq
817 aa
AA seq
DB search
MFPQDPVSRAPQGDAFPPQGAAPSPTPSPLLANLNPEQLAAVTLPSGHALILAGAGSGKT
RVLTTRIAWLLQNGLATPGGILAVTFTNKAAKEMVARLSAMLPVNVRGMWIGTFHGLCNR
LLRAHHKAAGLPQAFQILDTQDQLSAIKRLCKQYNVDTERFVPKQLQYFIAGCKEEGMRP
GDVPTHDSDARKKVEIYQLYEEQCQREGVVDFGELMLRSFELLRDNDPIRAHYQRRFAHI
LVDEFQDTNKLQYAWLKQLAGDEVAGHFEPQGSVMAVGDDDQSIYAFRGARVGNMQDFVR
EFDVERQIKLEQNYRSYSNILDSANALISHNSKRLGKNLRTEQGPGEPVRVYEAASDLQE
AQWMVDEIRQLVRSDGVARQEVAILYRSNAQSRVIETALFNAAVPYRVYGGLRFFERAEI
KHALAYLRLLENPQDDTSFLRVVNFPPRGIGARSLELLQDAANGAGCSLHDAVSTISGKA
GSNLTAFVAQIDVLREQTQGQTLRAIIEQMLEASGLLEHYRAERDGQDRVENLEELVNAA
ESFVMLEGFGRDAVALPLDEHGEPLTQSPASQGLDLNAPLLDAPLSGPPGVDQDTGETLS
PLGAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDVVFIGGLEEGLCPHENALSEQ
GGIEEERRLMYVAITRARKRLYLSHSQTRMLHGQTRYAMKSRFFDELPESALKWITPKQS
AFGRTAPFSEAASAYGTSARGQFGLNSERFASPPVPPQKLPAAHGLSAGKKVFHTKFGEG
KVLAIEGTGDDARAQVSFARHGTKWLALAVAKLTLVD
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgttcccacaagacccggtttcgcgcgcgccgcagggcgacgccttccctccgcaaggc
gctgcgccgtcgccaaccccttcgccgctgctggcgaacctcaaccccgagcagcttgcc
gccgtgacgctgccgtcgggccacgcgctcatccttgccggggccggttccggcaaaacc
cgcgtgctcactacgcgcatcgcctggctgctgcaaaacggcttggccacgccgggcggc
attttggcggtcacctttaccaacaaggccgccaaggaaatggtggcgcggctctcggcc
atgctgccggtgaacgtgcgcggcatgtggattggcactttccacggcctgtgcaaccgg
ctgctgcgcgcgcaccacaaggcagctggtctgccgcaggcgttccagattctggacacg
caagaccagctctcggccatcaaacgcctgtgcaagcaatacaacgtcgacaccgaacgc
ttcgtgcccaagcagctgcagtatttcattgccggctgcaaggaagagggcatgcgcccc
ggcgacgtgcccacgcacgacagtgacgcgcgcaagaaggtcgagatctaccagctgtat
gaagagcagtgccagcgcgaaggcgtggtcgatttcggcgagctgatgctgcgcagcttc
gagctgctgcgggacaacgacccgattcgggcgcactaccagcgccgctttgcgcacatc
ctggtggatgagtttcaggacaccaacaagctgcagtacgcatggctcaagcagctcgcc
ggcgacgaagtggccggccatttcgagccgcagggcagcgtgatggcggtgggcgacgac
gaccagagcatctatgcttttcgcggcgcgcgcgtgggcaacatgcaggatttcgtgcgc
gagttcgacgtcgagcggcagatcaagctggagcaaaactaccgcagctacagcaacatc
ctggacagcgcgaacgcgcttatctcgcacaacagcaagcgcctgggcaagaacctgcgg
acggagcaaggccccggcgaaccggtgcgcgtgtacgaggcggcgagcgacttgcaggaa
gcgcagtggatggtggacgaaatccgccaactggtgcgcagcgacggcgtggcgcggcag
gaagtcgccatcctgtaccgcagcaacgcgcaaagccgggtcattgaaacagcgctgttc
aacgccgcagtgccctaccgggtgtatggcggccttaggtttttcgaacgcgccgaaatc
aagcacgcgctggcctatctgcgcctgctggagaacccgcaggacgacaccagcttcctg
cgcgtggtgaactttccgccgcgcggcattggcgcacgcagcctggagctgctgcaggac
gccgccaatggcgccggctgctcgctgcacgacgcggtcagcaccatcagcggcaaggcc
ggcagcaacctgaccgcctttgtcgcgcaaatcgacgtgctgcgcgagcagacacagggc
cagacgctgcgcgccatcatcgagcagatgctggaagccagtggcctgctggaacactac
cgcgccgagcgcgacggccaggaccgggtcgaaaacctggaagagctcgtcaacgccgct
gagagctttgtcatgctggagggctttggccgcgacgccgtggcgctgcctctcgatgag
catggagagccgctgacccaaagcccggccagccaagggctggacctcaacgcgccgctg
ctggatgcgcccctttccggcccgccgggggttgaccaggacaccggcgaaaccctctcg
cccctcggcgccttcctgacccacgccgcgctcgaagccggcgacaaccaggcccaggcc
gggcaggacgccgtgcagctgatgacggtgcacgccagcaagggtctggagttcgatgtg
gtcttcattggcggcctggaagagggcctgtgcccgcacgaaaacgccctgagtgaacag
ggtggtatcgaggaagagcgccgcctgatgtacgtggcgatcacgcgcgccagaaagcgc
ctgtacctgagccactcgcaaacgcgcatgctgcacggtcagacgcgctacgccatgaag
agccgcttcttcgacgaactgcccgaatcggcgctcaaatggattacgcccaaacaatcc
gcgtttggccggactgctccgttttcagaagctgctagcgcttatgggacgagcgctaga
ggccaatttggcttgaattccgagcgctttgccagcccgccggtgccgccgcaaaagctg
cctgcggcgcacgggctgtctgcaggcaagaaggtgttccacaccaagtttggcgaaggc
aaggtgctggccattgaaggcacgggcgacgatgcgcgggcgcaggtgagttttgcgcgc
catggcaccaagtggctggcgctggcggtggcgaagttgacgctggtggattga
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