Simplicispira suum: C6571_03585
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Entry
C6571_03585 CDS
T05361
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
simp
Simplicispira suum
Pathway
simp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
simp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C6571_03585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
simp03019
]
C6571_03585
Enzymes [BR:
simp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C6571_03585
Messenger RNA biogenesis [BR:
simp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C6571_03585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AVO40485
UniProt:
A0A2S0MX74
LinkDB
All DBs
Position
complement(753082..754533)
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AA seq
483 aa
AA seq
DB search
MTSSFSNLSLAEPLARAVAEMGYESMTPIQEQAIPVVLTGQDVMGAAQTGTGKTAAFSLP
LLQRLLKHESSSTSPARHPVRALVLLPTRELADQVAQQVALYAKYTKLRSTVVFGGMDMK
PQTLELKKGVEILVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSY
LPKQRTTLLFSATFSPEIKRLAGSYLQNPVTIEVARPNETASTVEQHFYSAGDDDKRRAI
HQVLKSRGIKQAFIFVNSKLGCARLARSLEREGLKTTALHGDKSQDERLKALEAFKSGEV
DLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVTLVSGSDTRL
VADIEKLLKTKIEIEAIEYDNERPQGRFNDGRRVWHEAEEGASAPRATHPERAGRSRGGF
RPAPVSRDPFFDKPYEAPAESQAPGWEAPARPARSSSSPNIKQRRMVAALFKSPPAPEPV
NES
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaccagttccttttccaatctttcgctggcagaaccgctggcacgcgccgtagccgaa
atgggctacgaatccatgacccccattcaggagcaggccatcccggtggtgctcacgggc
caggatgtgatgggcgcggcccagaccggcaccggcaaaaccgccgcgttttccctgccg
cttctgcagcgtctgctcaagcatgagagcagttccacctcgccagcccgccacccggtg
cgcgccctggtgctgctgcccacgcgcgagctggccgaccaggtcgcgcagcaggtagcg
ctctacgccaagtacaccaagctgcgcagcaccgtggtgtttggcggcatggacatgaag
ccgcagacgctggagctgaaaaaaggcgtggaaatcctggttgccacgcccggtcgcctg
ctggaccacatcgaagccaagaacgcggtgctcaaccaagtggagtacgtggtgctcgac
gaagccgaccgcatgctcgacatcggcttcctgcccgacctgcagcgcatcctctcctac
ctgcccaagcagcgcaccacgctcttgttcagcgccaccttctcgcccgagatcaagcgc
ctggcgggcagctacctgcaaaacccggtcaccatcgaagtggcgcggccgaacgaaacg
gcttccactgtcgagcagcatttctacagcgcgggcgacgacgacaagcgccgcgccatc
caccaggtgcttaagagccggggcatcaagcaggccttcatcttcgtcaacagcaagctc
ggctgcgcccgtctggcgcgcagcctggagcgcgaaggcctcaagaccacggcgctgcat
ggcgacaaaagccaggacgagcgtctcaaggccctggaagccttcaagagcggcgaagtc
gatttgctggtctgcaccgacgttgccgcgcgaggcctggacatcaaggacgtgccggcg
gttttcaacttcgacgtgccgttcaacgccgaagactatgtgcaccgcattggccgcacc
ggccgcgcaggggcatcggggcttgctgtcaccctggtttcgggcagcgatacgcgcctg
gtagccgacatcgagaagctcctcaagaccaagatcgagatcgaggccatcgaatacgac
aacgagcgcccgcagggccgcttcaacgacggccggcgcgtctggcacgaggccgaagag
ggcgccagtgcgccgcgcgccacccacccggagcgtgcagggcgttcgcgtggcggtttt
cgacccgcgccggtctcgcgcgaccccttcttcgacaagccctacgaggccccggcagag
agccaagcgcccggctgggaggccccggcgcgcccggcgcgcagcagcagttcacccaat
atcaagcagcgccgcatggtggctgcgctgttcaagtcgccgcctgcccctgagccagtg
aacgagagttga
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