Simplicispira suum: C6571_05080
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Entry
C6571_05080 CDS
T05361
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
simp
Simplicispira suum
Pathway
simp00521
Streptomycin biosynthesis
simp00523
Polyketide sugar unit biosynthesis
simp00525
Acarbose and validamycin biosynthesis
simp00541
Biosynthesis of various nucleotide sugars
simp01055
Biosynthesis of vancomycin group antibiotics
simp01100
Metabolic pathways
simp01110
Biosynthesis of secondary metabolites
simp01250
Biosynthesis of nucleotide sugars
Module
simp_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
simp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C6571_05080 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C6571_05080 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C6571_05080 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C6571_05080 (rfbB)
00525 Acarbose and validamycin biosynthesis
C6571_05080 (rfbB)
Enzymes [BR:
simp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C6571_05080 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
AVO40741
UniProt:
A0A2S0MYE6
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Position
complement(1077908..1078987)
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AA seq
359 aa
AA seq
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MILVTGGAGFIGANFVLDWLANSDEPVLNLDKLTYAGNRNNLASVDGDARHVFVQGDIGD
TALVERLLAEHKPRAVVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLQAVRQYWQALCAI
EKEAFRFLHVSTDEVYGTLAPDAPAFTETHTTEPNSPYSASKAASDHLVRAWHHTFGLPV
LTTNCSNNYGPYHFPEKLIPLMIVNALAGKSLPVYGDGMQVRDWLYVADHCSAIRRVLEA
GKPGETYNVGGWNEMPNIDIVHTVCRLLDELRPRADGKPYAEQISYVQDRPGHDRRYAID
ARKIERELGWKPAETFESGIRKTVQWYLEHAGWVADVQTGAYRDWVQTQYAADAVAASA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcgttactggcggagccggcttcatcggcgccaactttgtgctcgactggctg
gcaaacagcgacgagcctgttctcaacctcgacaagctcacctacgccggcaaccgcaac
aacctggccagtgtggatggcgatgcgcgccacgtgttcgtgcagggcgatattggcgac
accgccttggtcgagcgcctgctcgcagagcacaagccgcgcgccgtggtgaacttcgcc
gccgagtcgcatgtcgaccgctccattcacgggccggaagacttcattcagaccaacgtc
gtgggaactttcaggcttttgcaggccgtacggcaatactggcaagcgctttgtgctata
gaaaaagaagcattccggttcctgcacgtcagcaccgacgaggtctacggcaccctcgcg
ccggacgccccggcgtttaccgagacgcacaccaccgagcccaacagcccctattcggcc
agcaaggccgccagcgaccacctggtgcgcgcctggcaccacaccttcggcctgccggtg
ctcacgaccaactgcagcaacaactacggcccctaccatttcccggaaaaactcattccg
ctgatgatcgtcaacgcgctcgcgggcaagagcctgccggtgtacggtgacggcatgcag
gtgcgcgactggctctacgtcgccgaccactgcagcgccatccgccgcgtgctggaagcc
gggaaacccggtgagacctacaacgtcggtggctggaacgagatgcccaatatcgacatc
gtccacaccgtctgtcgcctgctcgacgaattgcgcccgcgcgccgatggcaagccgtac
gctgagcagatcagctacgtgcaagaccgtcccggccacgaccgccgctacgccattgac
gcgcgcaagatcgaacgcgaactgggctggaagcctgccgagacatttgagtccggcatt
cgcaagacggtgcagtggtacctggagcatgccggctgggtggccgacgtccagactggc
gcctaccgtgactgggtgcagacgcagtacgcagcagacgccgtggccgccagcgcatga
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