Simplicispira suum: C6571_09625
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Entry
C6571_09625 CDS
T05361
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
simp
Simplicispira suum
Brite
KEGG Orthology (KO) [BR:
simp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
simp03000
]
C6571_09625
Transcription factors [BR:
simp03000
]
Prokaryotic type
Helix-turn-helix
Other families
C6571_09625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
GAF
Sigma54_activ_2
AAA_lid_14
HTH_30
HTH_28
PAS
HTH_29
HTH_Tnp_ISL3
HTH_23
AAA_5
HTH_7
HTH_22
PAS_4
HTH_17
HTH_11
HTH_psq
I-HmuI_NUMOD-like
HTH_20
HTH_AsnC-type
PAS_8
UBA_HOIP
HTH_3
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AVO41518
UniProt:
A0A2S0N052
LinkDB
All DBs
Position
complement(2077712..2079676)
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AA seq
654 aa
AA seq
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MPSNSAPLALRQARQHLLEFGQCPSGLVNERLARSWSRSMAAGLAPNARVRAPDPVSSGS
LRHALSASHTLLAHSRPIMEYVFDQVRHSQSVVVLADPRGMLMHTLGDAHFADKAARVAL
SCGASWHEEHRGTNAIGTALVEGCAVQIHGSEHFLERNGFLTCAASPIVSATGEMLGILD
ISSDHRSGHAHTLGLVSTAARMIENRLITAACKRDIRLHLHPQPEGIGSMAEGIVAVSSD
GWIIGANRAALAQLGLQIGDIGGAQLEHVLDVRLEQLLTQHQRRPLQTQMLRLHNGAVLF
AQVQVDAAAWPSPAGVVGARAGAVPAADDALARLDTGDARSRAAADKARRVLGKPIAVLI
QGECGVGKEVFARAMHASGPRRGAPFVAINCGAIPETLIEAELFGYVAGAFTGARKEGSL
GRLREADGGTLFLDEIGDMPLPMQTRLLRVLQERSVTPVGSGTAVSVDFALVCATHCQLL
EAAAQGRFRQDLYYRINGLTLQLPALRERSDFAALTQRLLQDLHPERPLQLAPELYGQLA
GYAWPGNLRQVASVLRTACAMLNDDEDTLDWTHMPDDLIAALSFPSQNPTSAPFPANPVA
GRQATLNLQELSHAAIQQALQSTRGNVTQAARQLGISRQTIYRRLEGSTVRQPS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
gtgccatcgaattccgcccccctggccttgcgacaggccaggcagcatctgcttgaattt
ggccaatgccccagtggcctggtcaatgagcggctcgcgcgttcgtggtcgcgcagcatg
gctgcgggactcgccccgaatgcgcgcgtacgggcaccggaccccgtcagcagtggcagc
ctgcgccacgccctgagcgccagccatacgctgctggcgcattcgcgccccatcatggaa
tacgtgtttgatcaggtgcgccacagccagagcgtggtggtgctcgccgacccccgcggc
atgctgatgcacaccctcggcgacgcacactttgccgacaaggcggcgcgcgtagccctg
tcgtgcggtgcgtcctggcacgaagagcatcgcggcaccaacgccattggcacggcgctg
gtcgagggctgcgccgtgcagatccatggctcggagcatttcctggagcgcaacggcttc
ctcacctgcgccgcctcgcccattgtgtcggccacgggcgagatgttgggcattctggat
atctccagcgaccaccgaagcggccacgcgcacacgctgggcctggtcagcacggcagcc
cgcatgatcgagaaccgcttgatcacagccgcctgcaagcgcgacatccgcctgcatctg
cacccgcaacccgaaggcattggtagcatggccgagggcatcgtcgcggtgtcgagcgac
ggctggatcattggcgccaaccgcgccgcacttgcccaactgggcctgcagatcggagac
attggcggggcgcagctcgaacatgtgctcgacgtccgcctggagcagctcctcacgcag
caccagcgccgccccctgcaaacgcagatgctgcgcctgcacaacggcgccgtgctgttt
gcacaagtgcaagtggatgcggctgcatggcccagccccgcaggggtggtaggcgcacgc
gctggcgccgtcccggctgccgacgatgccctggcgcgcctggataccggcgatgcacgc
tcgcgcgctgctgccgacaaagcccgccgcgtgctgggcaaaccgattgcggtgctgatt
cagggcgagtgtggtgtcggaaaggaagtctttgctcgcgccatgcacgccagcgggccc
cggcgcggcgcaccttttgtggccatcaactgcggcgccatccccgaaaccctgatcgaa
gccgagctatttggctatgtagcaggggcttttaccggcgcacgcaaggagggcagcctc
gggcgcctgcgcgaagctgatggcggaacgctgtttctcgatgaaatcggcgatatgccg
ctgcccatgcaaacgcgtttgcttcgcgtactgcaagagcgcagtgttaccccggtcggg
tcaggcacggcggtctcagtggactttgccctggtctgcgctacgcactgccagctactg
gaagccgctgcgcaaggacggttccgccaagacctgtactaccgcatcaatggcctgaca
ctgcagttgccagcactgcgtgagcgcagcgacttcgcggcgctgacccagcgcctgctg
caagacctgcacccggagcgcccactgcaattggcgcccgagctgtatgggcagctggcg
ggatacgcctggcccgggaacttgcgccaagtcgccagcgtgctgcgcactgcctgcgcc
atgttgaacgatgacgaagacacgctggactggacccacatgcccgatgacctgatcgcg
gccctgtcgtttccttcgcaaaacccgacgtctgcaccgttccccgcaaaccctgtagca
ggccggcaagccacactcaatcttcaggagttgtcgcacgcggccatccagcaagcattg
caaagcacgcgtggcaacgtcacccaggcggcgcggcagctgggtatcagccgacagacg
atttaccgcaggctcgaaggcagcaccgtccgacagccttcttga
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