Simplicispira suum: C6571_13260
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Entry
C6571_13260 CDS
T05361
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
simp
Simplicispira suum
Pathway
simp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
simp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C6571_13260 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
simp03019
]
C6571_13260 (pnp)
03016 Transfer RNA biogenesis [BR:
simp03016
]
C6571_13260 (pnp)
Enzymes [BR:
simp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C6571_13260 (pnp)
Messenger RNA biogenesis [BR:
simp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C6571_13260 (pnp)
Transfer RNA biogenesis [BR:
simp03016
]
Prokaryotic type
tRNA degradation factors
C6571_13260 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
DUF5813
OB_RRP5_4th
CRS1_YhbY
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AVO42119
UniProt:
A0A2S0N1U5
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All DBs
Position
2855969..2858230
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AA seq
753 aa
AA seq
DB search
MSIFNKVSKTFQWGDKTVVMETGQMARQASGAVLVNIDDTVVLATVVASKGAKPGQDFFP
LTVDYIEKTYAAGKIPGSFFKREAKPSEHETLTSRLIDRPIRPLFPEGFYNEVHVVIHTV
SLNPEVDADIAALIASSAALAISGIPFNGPIGAARVGYINGEYVLNPGQTARKSSQMDLI
VAGTEAAVLMVESEAQQLPEDVMLGAVVFGHEQSRVAINAIHELVRDAGKPMWDWQAPAK
DEPLIAKVSALGEDKLRAAYQNRNKQVRTHACRDAYAAVKAALKEEGVEFDAVKVESMLF
DIEAKIVRSQILSGEPRIDGRDTRTVRPIEISTSVLPRTHGSALFTRGETQALVVSTLGT
ERDAQRIDALMGEYEDRFLFHYNMPPFATGEVGRMGSTKRREIGHGRLAKRALVAVLPSK
EEFPYTMRVVSEITESNGSSSMASVCGGCLSLMDAGVPMKAHVAGIAMGLIKEDNRFAVL
TDILGDEDHLGDMDFKVAGTTAGITALQMDIKIQGITKEIMQVALAQAKEARMHILGEMQ
KAMGEAKQEVSSFAPKLYTMKINPEKIRDVIGKGGSVIRALTEETGCQINIDESGVITIA
STDGERAEEAKRRIEQITAEVEIGKVYEGPVTKILDFGALINLLPGKDGLLHISQIAHER
VERVSDYLQEGQIVRVKVLETDEKGRVKLSMKALAERTGGSDRPAPAERGDRQERGERQD
RGERRDRAEQPAREAEQQQQQALPLGGTSQHEA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttcaacaaagtcagcaagacgttccaatggggcgacaaaacagtcgtcatg
gaaaccggccagatggcccgccaggcgtctggcgcggtgctggtgaatatcgacgacacg
gtggtcctggccaccgtagtggcttccaagggagccaagccgggccaggatttcttcccg
ctcacggtggattacatcgagaagacctacgccgcaggcaagatccccggcagctttttc
aagcgcgaagccaagcccagcgagcacgaaaccctgaccagccgcctgatcgatcgcccg
atccgcccgctgttccccgaaggcttctacaacgaagtgcatgtggtcatccacacggtg
tccttgaaccctgaagtggacgccgacattgcggcactgattgcatcgagcgcagcgctg
gcgatctccggcattccgttcaacggcccgattggcgcggcccgcgtgggctacatcaac
ggcgaatacgtgctcaaccccggccagacggcgcgcaagagcagccagatggacctgatc
gttgcaggcaccgaagccgccgtgttgatggtcgagtccgaagcgcagcaactgcccgaa
gacgtgatgctgggcgctgtggtgtttggccacgagcagagccgcgtggcgatcaacgcc
atccatgaactcgtgcgcgatgccggcaagcccatgtgggattggcaggcgccggccaag
gacgagccgctgatcgccaaggtgtccgcactgggcgaagacaagctgcgcgctgcctac
cagaaccgcaacaagcaggtgcgtacgcacgcgtgccgcgacgcctatgcggcggtgaag
gctgcgctcaaggaagaaggcgttgaattcgacgccgtcaaggtcgagagcatgctgttc
gacatcgaagccaagatcgtccgcagccagattttgtcgggcgagccgcgcatcgacggg
cgcgacacgcgcaccgtgcgccccatcgaaatcagcaccagcgtgctgccccgcacccac
gggtcggcgcttttcacgcgtggcgagacgcaggcgctagtggtgtccactctgggcacc
gagcgcgacgcgcagcgcattgacgcactgatgggcgagtacgaagaccgcttcctgttc
cactacaacatgcctccctttgccaccggtgaggtgggccgcatgggctcgaccaagcgc
cgcgaaatcggccacgggcgcttggccaagcgtgcgctggtcgccgtgctgccaagcaag
gaagagttcccctacaccatgcgcgtggtgtcggaaatcaccgagtccaacggctcgtcg
tcgatggcgtcggtctgcggcggctgtctgtcgctgatggacgccggcgtgcccatgaag
gcgcatgtggccggcattgccatgggcctgatcaaggaagacaaccgctttgccgtgctg
accgacatcctgggcgacgaagatcacctgggcgacatggacttcaaggtggcgggcacc
acagccggcatcaccgcgctgcaaatggacatcaagatccagggcatcaccaaggaaatc
atgcaggtcgcactggctcaggccaaggaagcgcgcatgcacatcctgggcgagatgcaa
aaggccatgggcgaggccaagcaagaggtcagcagctttgcacccaagctctacaccatg
aagatcaaccccgagaagattcgcgacgtgatcggcaagggtggatcggtgattcgtgcg
ctgaccgaagaaaccggctgccagatcaatatcgacgagagcggcgtcatcaccatcgcg
tcgaccgacggcgagcgcgccgaagaggccaagcgccgcatcgagcagatcacggcggaa
gtcgaaatcggcaaggtctacgaaggcccggtcaccaagattctcgacttcggcgcgctg
atcaatctgctgcccggcaaagacggtctcctgcacatcagccagatcgcccacgagcgt
gttgagcgcgtcagcgactacctgcaggagggccagatcgtccgcgtcaaggtgttggaa
actgacgaaaaaggtcgcgtcaagttgtcgatgaaagcactggcagaacgcactggcggc
agcgaccgtccggcgcctgccgaacgcggcgatcgccaagagcgtggtgaacgccaggat
cgcggcgagcgccgtgatcgcgccgagcagcccgcgcgcgaagccgagcagcaacagcag
caggctttgccgctgggcggcacatcgcaacacgaagcgtaa
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