Saccharolobus islandicus Y.N.15.51: YN1551_0065
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Entry
YN1551_0065 CDS
T00902
Name
(GenBank) protein of unknown function DUF87
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sin
Saccharolobus islandicus Y.N.15.51
Brite
KEGG Orthology (KO) [BR:
sin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sin03400
]
YN1551_0065
DNA repair and recombination proteins [BR:
sin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
YN1551_0065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
TrwB_AAD_bind
AAA_10
FtsK_SpoIIIE
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACP47263
UniProt:
C3NJ96
LinkDB
All DBs
Position
complement(56478..57980)
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AA seq
500 aa
AA seq
DB search
MIIGYVIGQATTQEALILAERPVRLGTYVVLEYDNVKALGLITNVTRGSPMLDDNMNDIE
IVQRLKQFNNSIPVYTKAKVKMLCDMNNHFLMPDIPPFAGTPAREAEDEELKSIYSQDGQ
IRIGSLIGKNVEVKLNINSFARHLAILAATGSGKSNTVAVLSQRISELGGSVLIFDYHGE
YYDSDIKNLNRIEPKLNPLYMTPREFSTLLEIRENAIIQYRILRRAFIKVTNEIRKKLKE
GQIPFSTLNSQFYELMRDELETQGNSDKKSSAKDEVLNKFEEFMDRYSNVIDLTSSDIIE
KVKRGKVNVVSLTQLDEDSMDAVVSHYLRRILDSRKDFKRSKNSGLKFPIIAVIEEAHVF
LSKNENTLTKYWASRIAREGRKFGVGLTIVSQRPKGLDENILSQMTNKIILKIIEPTDKK
YILESSDNLSEDLAEQLSSLDVGEAIIIGKIVKLPAVVKIDIFEGKLLGSDPDMIGEWKR
AEENERIAKGFADFGTEIGD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgataattggttatgtaattggtcaagctacaacacaagaggctttgatactagctgaa
aggccagttagattaggaacttatgttgttctagaatatgataacgttaaggcccttgga
ctaataacaaacgtgactagaggtagccctatgctagatgataatatgaatgatatagaa
atcgttcaaagattaaaacaattcaacaatagcatacccgtttatacaaaggctaaagta
aaaatgttatgtgatatgaataatcactttttaatgcccgatatacccccgttcgctgga
accccagctagagaggctgaagatgaggagttaaaaagtatttattcgcaagatggccaa
attagaataggaagcttaataggtaaaaacgtggaggttaaattaaatataaattccttt
gcaagacatttagctattttagcagctactggttctgggaagtcaaatacagtagcagtt
ctttctcaaagaatttctgaacttgggggatctgttcttatctttgattatcatggagag
tactatgatagcgatataaagaatctaaatcgtattgaacctaaacttaaccctctttat
atgaccccaagggaattttctacgttactagaaataagagagaatgcaattatacagtac
agaattttaagaagagctttcataaaggtaacaaatgagataagaaaaaagctaaaagaa
ggacaaataccattttctactctaaatagccaattttatgaactaatgagagacgaattg
gaaactcaaggaaatagtgataaaaagagtagtgcaaaggatgaggtactgaataagttc
gaagaattcatggataggtattcaaacgtcattgatcttacatcttcagatataattgaa
aaagtaaagagaggtaaggtaaacgttgtaagcctaacacaattagatgaagactcaatg
gatgcagtagtctcacattatttaagaagaatccttgattctaggaaagattttaaaaga
agcaaaaatagtggccttaaattcccaataatagccgtaatagaagaagctcacgttttc
ttgtctaaaaacgagaatacattaaccaagtactgggcgtccaggatagcaagagagggc
agaaaattcggagttggattaacaatagtaagtcaaaggcctaaaggcctagatgaaaat
atattaagtcaaatgacaaacaagatcattttaaagataattgaacctactgataaaaaa
tacatcttagagtcaagtgataatctaagcgaagatttagctgaacaactgtcctccttg
gacgttggtgaggctataattataggtaaaatagtaaaattacctgcagttgtgaagata
gatatatttgaaggaaaattgcttggatcagaccccgacatgataggggaatggaagaga
gcagaagaaaatgaaagaatagctaaaggctttgccgactttggaacggaaattggtgat
tga
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