Sphingopyxis indica: KNJ79_00155
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Entry
KNJ79_00155 CDS
T09492
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
sina
Sphingopyxis indica
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sina03036
]
KNJ79_00155
Chromosome and associated proteins [BR:
sina03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
KNJ79_00155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
AAA
Motif
Other DBs
NCBI-ProteinID:
WOF43435
LinkDB
All DBs
Position
32434..36792
Genome browser
AA seq
1452 aa
AA seq
DB search
MRTILPDAEAGAAPISSSLSSPAATPAARLFDAAQRLLPLLEDGTPFDTGQLRIAMTSAY
GQTDAEGAWDWKMAYDACEAAQVLLLRRYGRALAARGRAPQRQLAMWQRIAARVPTQTRR
SEEGQSFQQFSTPLPLAFVAAFAAAIRPGDCVLEPSAGTGMLAVHAGLAGATLALNEFAE
LRAGLLELLFAPTLVSRHDAAAIDDRLDPGVAPDVVLINPPFSSLVNVDRKMKGAALRHI
ASALARLKDGGRLVAIVGAGCSPEAPAWRGAFIRLQESATLRFSAAIAGKVFARHGTTIP
TRLIVIDKVPAGDPAQLPQSRGEAPDLATLLQWVEEDLPPRPAPPALPVAPATAVQARAT
ANVDDACARASAKAAPPGDAGVELGYETLDWVPPEGQLGDTIYEPYALQSLSIPGARPHP
TALVQSASMASVAPPKPVYRPHLPAHLVSEGVLSDAQLESIIYAGEAHGGHLSGAWTVDA
TWDVVGAASDDAEGAVQFRRGWFLGDGTGAGKGRQVAGIILDNMLKGRRRALWISKSDKL
LEDAQRDWSALGQEKLLVTPLSRFRQGAPVKLGEAILFTTYATLRSQGREGKASRIEQIV
EWLGRDFDGVIIFDEAHAMANAAGGKGERGDQKPSQQGRAGLRLQHALPEARIVYVSATG
ATTVQNLAYAQRLGLWGGSDFPFASRADFVAAIEDGGVAAMEVLARDLKALGLYASRSLS
FDGVEYELLEHALTGEQRRIYDSYAAAFQVIHNNLNAAMEAAGVTSAEHGTLNAQAKSAA
RSAFESTKQRFFNHLITAMQTPSAIASIARDLEAGHAAVVQIVSTGEALQERRLAEIQAD
EWNDVSVDITPREYVLDYLASSFPVQLFEPCTDGDGNLSSRPAYDGDGNMIVSREACRRR
DAMIEKLASLPPVPGALDQIVQHFGTAMVAEVTGRSRRIVPRARESGDVRFAVENRPGSA
NVGETHAFMDDEKRILVFSEAGGTGRSYHADLGAKNQRRRIHYLLEAGWKADAAIQGFGR
TNRTNQRQPPMFRPVSTDVKAQKRFISTIARRLDTMGAITRGQRQTGGQNMFSAHDNLES
FYARDALRQLYMLIVRGKVEGCSLLCFEAATGLSLLDAEGGIRDELPPITTFLNRMLALT
IDLQNILFDAFEGLLVARVEAAIAAGSYEVGLETLRAESFIVTDRRTIYTHPGTGAETQL
LTIDRIDRVVPLSLGKVLDLARAEEAALLVNGRSGRAAVKLRARSLVDDEGAVHRRFRLI
RPMETVLILAEQFGASHWTIVDAEAFTAAWEAELRELPEYETGTLHMVSGLLLPIWRSLP
NESTRVYRLQTDAGERVIGRRVSPAWAARIVDDGPPKLSAEQAWSMLLAGDAVFHLAEGQ
RVARVRAMNDWRIELTGFNDLGIERLKAFGLISEIVSWKLKLYVPAGAAGADVFARLVDR
FPIERVSDRKAA
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccattttgcccgacgccgaagccggcgccgcccccatttcctcatctctttcc
tcacctgcggccacccctgcggcgcggctcttcgatgcggcccagcgccttcttccgctg
ctcgaggacggaacgcccttcgacaccgggcagctccggatcgcgatgacgtcggcctac
ggccagaccgatgccgagggcgcatgggactggaagatggcttatgatgcgtgcgaggcg
gcgcaggtcctgctgctgcgccgctacgggcgcgcgctggccgctcgcggccgcgcgccg
cagcgccagctcgccatgtggcagcgcatcgcggcgcgtgtcccgacccagacgcggcgc
tccgaggaggggcagtccttccagcaattctcgaccccgctgccgctcgccttcgtcgcc
gctttcgctgccgcgatccggcccggcgattgcgtgctcgagccctcggcggggacggga
atgctcgccgtgcacgcgggtcttgccggcgcgacgctcgcgctcaacgaattcgccgaa
ctgcgcgcgggcttgctcgagctgctcttcgcgccgacgctggtcagccgtcacgatgcc
gcggcgatcgacgaccggctcgatcctggggtcgcgcccgatgtcgttctgatcaacccg
ccattctcctcactcgtgaatgtcgatcgcaagatgaagggcgcggcgcttcgtcacatc
gcctcggcgctggcgcggctgaaagacggcggccggcttgtcgccatcgtgggtgccggc
tgctcgcctgaggcgccggcatggcgcggcgccttcatccgcttgcaggaaagcgccacg
cttcgtttctcggcggcgatcgccggcaaggtcttcgccaggcatggcacgacgataccc
acccgcctcatcgtgatcgacaaggttcccgcgggcgatcccgcgcagcttccacaaagc
cgcggcgaagcccccgaccttgccacattgctccaatgggtcgaggaggatctgccgccg
cgcccggcaccgcccgctttgcccgttgcaccggcgacggcggtgcaggcccgagcgacg
gcgaatgttgatgacgcatgtgcccgggcttcggcaaaggctgcgccgcccggcgatgcc
ggcgtcgagcttggctatgaaacattggactgggtgccgcccgagggccagctcggcgac
acgatctacgagccctatgcacttcaatcgctctccattcccggggcgaggccgcatccc
accgcgctcgtccagtcggcctcgatggcatcggtcgcgccccccaagcctgtctatcga
ccgcatctgccggcgcatctcgtcagcgaaggcgtgctgtccgacgcgcagcttgaatcg
atcatctatgcgggcgaagcccatggcgggcatctctcgggtgcgtggacggtcgatgcc
acctgggacgtcgtcggcgccgcatccgatgacgcggaaggcgcggtgcagttccggcgc
ggctggttcctcggcgacggcaccggcgcgggcaaaggccggcaggtcgcgggcatcatt
ctcgataatatgctgaaaggccgccgccgtgcgctctggatctcgaagtcggacaagctg
ctcgaagacgcgcagcgcgactggtcggcgctggggcaggagaaattgctcgtcacgccg
ctgtcgcgcttccggcagggggcaccggtgaagctcggcgaggccattctcttcaccacc
tatgcgacattgcgttcgcaagggcgcgaggggaaggcgagccggatcgagcagatcgtc
gaatggctcggccgcgacttcgacggcgtcatcatcttcgatgaagcccatgcgatggcc
aatgccgcgggtgggaagggcgaacgcggcgatcagaagccttcgcagcaaggccgtgcc
gggcttcgcctccaacatgcgcttcccgaggcgcgcatcgtctatgtctcggcgacgggt
gccacgacggttcagaacctcgcttatgcgcagcgtctgggtctctggggcggcagtgat
ttccccttcgcatcgcgtgccgatttcgtcgcggcgatcgaggacggcggggttgcggcg
atggaagtgctcgcgcgcgacctgaaggcgctcggcctttacgcgtcgcgttcgctctcc
ttcgacggcgtcgaatatgagctgctcgaacatgcgctgacgggcgaacaacggcgcatc
tacgacagctatgccgccgccttccaggtcatccacaataatctcaatgccgcgatggag
gcggcgggggtgacgagcgcagaacatggcacattgaatgcccaggccaagtcggcggcg
cgatcggcgttcgagagcaccaagcagcgctttttcaaccatctcatcaccgcgatgcag
acgccgagcgcgatcgcgagcatcgcgcgcgatcttgaggcgggccatgcggcggtcgtt
cagattgtctcgaccggcgaggcgctgcaggagcggcggctggccgagatccaggcggac
gagtggaacgatgtgtcggtcgacatcacgccgcgcgaatatgtgctcgactatcttgcg
tcgagcttcccggtccagctcttcgagccctgcaccgacggcgacggcaatctgtcgtcg
cgcccggcctatgacggcgacggcaatatgatcgtcagccgcgaagcctgtcggcgccgc
gacgcgatgatcgagaagctggcgtcgctgccgcccgtgccgggcgcgctcgaccagatc
gtccagcatttcgggaccgctatggtggccgaggtgacggggcgctcgcggcggatcgtg
ccgcgggcccgcgagagtggcgacgtccgtttcgcggtcgagaaccgtccgggcagcgcc
aatgtcggcgagacccatgctttcatggacgatgagaagcgaattctcgtcttttcggaa
gccggcggcaccgggcgctcctatcatgccgaccttggcgcgaagaaccagcgccgccgt
atccactatctgctcgaggcgggctggaaggccgatgccgcgatccagggcttcgggcgc
acgaaccgcacgaaccagaggcagccgccgatgttccgcccggtatcgaccgacgtgaaa
gcgcagaagcgcttcatctcgacgatcgcgcggcggctcgacacgatgggcgcgatcacg
cgggggcagcggcagacgggcggccagaatatgttcagcgcgcacgacaatctggaatcc
ttctatgcccgcgacgcgctccgccagctctacatgctgatcgtgcgcggcaaggtggag
ggctgctcgctgctctgcttcgaggccgcgaccgggctgtcgctgctcgatgccgaaggc
gggattcgcgacgaactgccgccgatcaccaccttcctcaaccgcatgctcgcgctcacc
atcgacctacagaatatcctgttcgacgcgttcgaggggctgctcgtcgcccgggtcgag
gcggcgatcgcggcgggcagctatgaggtcggcctcgagacgctgcgcgccgagagcttc
atcgtcaccgatcgccggacgatctacacccatcccggcaccggcgccgagactcagctt
ctgacgatcgaccggattgaccgcgtcgtcccgctctcgctcggcaaggtgctcgatctc
gctcgggctgaagaagcggcgttgctggtgaacgggcgttcgggccgggcagcggtcaag
ctgcgcgcgcgcagcctcgtcgacgacgagggtgcggtgcatcgccgcttccgcctgatc
cgcccgatggagactgtactgatcctcgccgagcaattcggggcgagccactggactatc
gtcgatgcggaggcgtttaccgcggcgtgggaagccgaacttcgagagcttcctgaatat
gaaaccggcacgctccatatggtctcggggctcctgttgccgatctggcgcagcctgccg
aacgagtcgacacgggtctaccgcctgcagaccgatgctggcgagcgcgtgatcggccgc
cgcgtatcgcccgcatgggccgctcggatcgtcgatgacgggccgccgaagctgtcggcc
gaacaagcctggtcgatgttgctcgcgggcgatgccgttttccacctcgctgagggtcag
cgcgtcgcgcgcgtccgggccatgaacgactggcggatcgagcttaccggtttcaacgat
ctgggtatcgagcggctgaaggcatttggcttgatttcggagatcgtctcgtggaaattg
aagctctacgtgccggcaggggctgctggcgccgatgtgttcgcccggctcgtcgatcgg
tttccgatcgagcgggtcagcgaccgcaaggccgcctga
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