Sphingopyxis indica: KNJ79_00975
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Entry
KNJ79_00975 CDS
T09492
Name
(GenBank) autotransporter domain-containing protein
Organism
sina
Sphingopyxis indica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
WOF43572
LinkDB
All DBs
Position
206512..212217
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AA seq
1901 aa
AA seq
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MSAVSKSRLLATSAIAGLAIMQMASPAQAQDYGRFIPEGQQATIDNPEGETIEGEKNGIR
SSGTSLTLTNEGTIRGNGSYDGLDAPPEGGVLVDGGPATITNGGTISGGGHGISTAYFYN
ANTQLLEGRAIGVTVDNSGTISGEEHDGIRLIGGGAVTNSGTISGGFRPDGVPTSGDGVS
MFAYDDQDLSAVTAIGTLTNEAGGTVAGTRFGAIISGGAVVENEGSISGLTGGLYIQTNT
TEETGKTASVTNGGTISGGNGVTFGSNLESSELVNSGTITGTSGFAIANGSYGRATITNE
ADGVIEGATIGVYDDEGGIDLVNAGTIRGNGSYDGFDEPPHAGVTILGAPSTVENSGTIS
GAGAGITTAYYYNVATGQIEGRATDTEVSNSGAISGESNDGIRLIGGGSVTNSGAISGSG
RGDADGISMYAYTDQAAEDYSALVTNQAGGTISGERFGIILSGGGDIDNAGAIEGIVGGV
FVQGTALDSDDRSGVTASVVNSGTIRGTGDFGGSDGDGHGLVFGSDMASATLDNSGEITS
DFGVGVLQGSLADVTVTNAADGTITGATSGVYANSEGTLALVNAGTIRGEGSYDGFDRTP
DAGVTIGTASSSVTNSGTISGAGAGITTVYVFDEETGALVGLAKGTEIDNSGTIAGESND
GVRLIGGGSVTNSGTISGTGAVAADGISMYGFADQASDDYSASVTNAAGGSIEGERFGII
LSGGGDVDNAGAITGTDGGVFIQGTALDSGDRSGLTASLANSGTITGTRADGLNGYGVGF
GSDLATASLDNSGTILSEAGAAVFHGTLGDVTIANAADGVMEGATHGIYAGGDGTLTLDN
AGTIRGNGAAEANDAPADAGVMIQSAGASVTNSGTISGAGYGIVTQYYFNEDTGQLEARA
TGTEIVNSGTIRGETNDGVRLFGGGSVANSGTIEGLSGELTDGVTIQAFAAQDTSGSAML
GSVVNEAGGTIAGVRYGVLAVSGASVTNAGTISGGLNGVVIGRQSSPGKAGELVNSGTIE
GGVLIDVDTATADNSGTIVSDTGVAFSSLGQIAFVNSGTLTGGDGVAATLSAFDDSVTLQ
TGSAITGLVDAGEGIDSLTLDGDVLELTEAQQVGAVAGFETLEVANGYWTSAGYVGEFES
VQIASGATLKVGEVATEFGPDSAILTTSVVTGGTLVLDFDSDEVLAEADDLVITGTGTVR
LEGAATIVVDRADAAQHTGRTEVANGTLVLTGEGRLASTVATEGDGVFQLGDGGTTGIFE
GDLVNDGRFVFNRSDDYDFIGAFSGTGTLDKMGAGTLSFTGDYDFDGITNILGGSVRIGG
MIDPETDFNVGGGSLDLSGNDQTIGGLAGQQGASVNIGANQLTVDQEENSEFAGEITGTG
GFAKTGSGTLNLTGTNSYTGPTTIGGGKLAVNGSISSPVFVNAGGALGGNGTVGSTNVGN
GGTIAPGNSIGRLTVAGDLAFAAGAVYEVEVNAAGQADRIDATGTVTIDSDASVAVLAAD
GNYAGRTDYVILTGAEGVEGTFGSVTSDLAFLDPLLRYSADTVTLSLYRNDVDFADVAVG
ANQAAVAGAIQSRGIDDPLFEAVVNQNAAGARAAYADLSGEIIASTISGLNDDSRYLRGA
LLGMAAPEASGAFVWGSAFGGWGDFAPDAGRTGMDTDHKGLVAGFGYGGNGFAAALSAGI
GSSDFDLAGKSDRAKADSKYLAVHAVYGTGEGPRAAFGLAYAWHDVDTNRSIGFAPLAQS
LTSQRDADTLQLFTELGYDVATGDVAVTPFARLALVRTESDPFVETGGSAALAVAKATEE
TTLLSLGVRAQGDGGDTGFKPYVSAAWNRAFDDRGARVRAGFASGGAPFTITGTLIPKSS
AELEAGFDYTTGAFTIGAGYMATLGSDRDTQGARITARFAF
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgtttcgaaatcccgtctgctcgcgaccagcgcgatcgccggtcttgccatc
atgcagatggcgtcgcccgcgcaggcccaggactatgggcgcttcatacccgaaggccag
caggcgacgatcgacaatcccgaaggcgaaacgatcgaaggcgaaaagaacggcatccgg
tcgagcggcacttcgctgactctcaccaacgaaggcacgatccgcggtaacggcagctac
gacgggctcgacgcgccgcccgagggcggcgtcctcgtcgacggcggccccgcgacgatc
accaacggcggcacgatctcgggcggcggccacggcatttcgaccgcctatttctacaac
gccaatacccagctgctcgaagggcgcgcgatcggcgtcacggtcgacaacagcggcacg
atcagcggcgaggagcatgacggcattcgcctgatcggcggcggcgcggtgaccaacagc
ggcacgatcagcggcgggttccgtcccgacggcgttccgacgagcggggacggcgtttcg
atgttcgcctatgacgatcaggacctgtcggccgtgacggcgatcggcacgctgaccaac
gaagcaggcggaacggtcgccggcacgcgtttcggcgcgatcatttcgggcggcgcggtc
gtcgagaatgaagggtcgatcagcggcttgaccggcggcctctatatccagacgaacacc
accgaagagacgggcaagaccgcgtcggtgaccaacggcggcaccatctcgggcggcaac
ggcgtcactttcggcagcaacctcgaatcgtccgaactggtcaacagcggcacgatcacc
ggcacgagcggcttcgccattgccaatggctcctatggccgggcgacgatcaccaacgaa
gcggacggggtgatcgagggcgcgacgatcggcgtctatgacgacgagggcggcatcgac
ctggtcaacgccgggacgatccgcggcaacggcagctacgacggcttcgacgagccgccg
cacgcgggcgtcaccatcctcggcgcgccctcgacggtcgagaacagcggcaccatttcg
ggcgccggcgcgggtatcaccaccgcctattattacaatgtcgcgaccggccagatcgaa
ggccgcgcgaccgataccgaagtcagcaacagcggcgcgatttcgggcgaaagcaatgac
ggtatccgcttgatcggcggcggcagcgtcaccaacagcggcgcgatcagcggcagcggg
cgcggcgatgccgacggcatctcgatgtacgcctataccgaccaggcggcggaggattac
agcgcgctcgtcaccaatcaggccggcggcacgatcagcggcgagcgcttcggcatcatc
ctgtcgggcggcggcgacatcgacaatgccggcgccatcgaagggatcgtcgggggcgtc
ttcgttcagggcaccgcgctcgacagcgacgaccgcagcggcgtgaccgcgagcgtcgtc
aattcggggacgatccgcggcaccggcgatttcggcggcagcgacggcgacggccacggg
ctcgtgttcggcagcgacatggcgagcgcgacgctcgacaacagcggcgagatcacgagc
gacttcggcgtcggcgtgctgcagggctcgctcgccgatgtgacggtgaccaatgccgca
gacggcacgatcaccggggcgacgtcgggcgtctatgcgaattcggaaggcacgctcgcg
ctcgtcaatgcgggaacgatccgcggcgagggcagctacgatggcttcgaccgcaccccc
gacgcgggcgtcaccatcggcaccgcgtcgtcgagcgtcaccaacagcggcaccatttcg
ggcgccggtgcgggcatcacgacggtctatgtgttcgacgaggagacgggtgcgctcgtc
gggctcgccaaggggaccgagatcgacaacagcggcacgatcgcgggcgaaagcaacgac
ggcgtgcgcctgatcggcggcggcagcgtgaccaacagcggcacgatcagcggcacgggc
gcggtcgcggccgacggcatctcgatgtatggcttcgccgaccaggcgagcgacgactat
agcgcgtcggtcacgaatgccgcgggcgggtcgatcgagggcgaacgcttcggcatcatc
ctgtcgggcggcggcgacgtcgacaatgccggcgccatcaccggcaccgacggcggcgtc
ttcatccagggcaccgcgctcgacagcggcgaccgcagcggactcaccgcgagcctcgcc
aattcggggacgatcaccggaacccgcgccgacgggctcaatggctatggcgtcggcttc
ggcagcgaccttgcgaccgccagcctcgacaacagcggcacgatcctcagcgaagcgggc
gccgcggtgttccacggcacgctcggcgacgtcacgatcgccaatgccgccgacggggtg
atggaaggcgcgacgcatggcatctatgccggcggcgacggcacgctgacgctcgacaat
gccggtacgatccgcggcaacggcgccgccgaggccaatgatgcgccagccgatgcgggc
gtgatgatccagtcggcgggcgcgtcggtcaccaacagcggcacgatttcgggtgccggc
tacgggatcgtcacccaatattatttcaatgaggacacgggccagctcgaagcgcgcgcg
acgggaaccgagatcgtcaacagcggcacgatccgcggcgagaccaatgacggcgtgcgc
ctgttcggcggcggcagcgtggccaacagcggcacgatcgaggggctttcgggcgaactg
accgacggcgtcaccatccaggccttcgccgcgcaggatacgagcggcagcgcgatgctc
ggcagcgtcgtcaacgaggccggcggcaccatcgcgggcgtgcgctatggcgtgctcgcg
gtgagcggggcgtcggtgaccaacgccggcacgatctcgggcggcctgaacggcgtcgtg
atcggcaggcagagcagccccggcaaggcgggcgaactcgtcaattcgggcacgatcgag
ggcggcgtgctgatcgacgtcgatacggcgactgccgacaacagcggcacgatcgtcagc
gacacgggcgtcgccttcagctcgctcggccagatcgccttcgtcaacagcggcaccttg
accggcggggacggcgtcgcggcgacgctgagtgctttcgacgacagcgtcaccttgcag
acgggcagcgcgatcaccggcctcgtcgacgcgggcgagggtatcgacagtctaacgctc
gacggcgatgtgctcgaactgaccgaggcgcagcaggtcggcgcggtcgcgggcttcgaa
acgctcgaggtcgcgaacggctattggacttcggcgggctatgtcggcgaattcgagagc
gtccagatcgcatcgggcgcgacgctgaaggtcggcgaagtggcgaccgagttcggtccc
gacagcgcgatcctgacgaccagcgtcgtcaccggcggcacgctggtgctcgatttcgac
agcgacgaagtgctggcggaggccgacgatctggtcatcaccggcaccggcaccgtccgg
ctggagggcgcggcaacgatcgtcgtcgaccgggccgacgccgcgcagcatacggggcgc
accgaggttgcgaacggcacgctggttctgaccggcgaaggccgtctggcctcgaccgtg
gcgaccgaaggcgacggcgtgtttcagctcggcgacggcggcacgaccggcatcttcgaa
ggcgatctcgtcaacgatggccgtttcgtcttcaaccggtcggacgattatgatttcatc
ggcgccttttcgggcaccggcacgctcgacaagatgggcgcggggacgctgtccttcacc
ggcgattatgatttcgacggcatcaccaacatccttggcggttcggtccgcatcgggggg
atgatcgaccccgaaaccgacttcaacgtcggcggcggatcgctcgacctcagcggcaac
gaccagacgatcggcggcctcgccggtcagcagggggcgagcgtcaacatcggcgcgaac
cagctgacggtcgatcaggaagagaatagcgagttcgcgggcgaaatcaccggcaccggc
ggcttcgccaagacgggcagcggcacgctaaacctgacgggaacgaacagctacaccggc
ccgacgacgatcggcggcggcaagctggcggtcaacggctcgatcagctcgccggtgttc
gtcaacgcgggcggcgcgctcggcggcaacggcaccgtcggatcgacgaacgtcggcaat
ggcggcacgatcgcgccgggcaactcgatcggacggctgacggtcgccggcgacctcgcc
ttcgcggcgggcgcggtctatgaggtcgaggtcaatgccgcggggcaggccgaccgcatc
gacgcgaccggcacggtcacgatcgacagcgatgcgagcgtcgcggtgctcgccgccgac
ggcaattatgccgggcgcaccgactatgtgatcctgaccggcgccgagggcgtcgagggg
accttcggatcggtgaccagcgaccttgcctttctcgatccgctgctgcgctacagcgcc
gacacggtgacgctgtcgctctatcgcaacgacgtcgatttcgccgacgtcgcggttggc
gccaaccaggcggcggtcgcgggtgcgatccagtcgcgcggcatcgacgatccgttgttc
gaggcggtggtgaaccagaatgcggcgggcgcgcgggcggcctatgccgacttgtcgggc
gaaatcatcgcgagcacgatcagcgggctgaatgacgacagccgctatctgcgcggcgcg
ctgctcggcatggcggcgcccgaggcgagcggcgccttcgtctggggctcggcgttcggc
ggctggggcgacttcgcgcccgacgccggccgcacgggcatggacaccgaccacaagggg
ctcgtcgcgggcttcggctatggcggcaatggctttgcggcggcgctctcggcgggcatc
ggcagctcggacttcgaccttgccggcaagagcgaccgcgcgaaggccgacagcaaatat
ctggcggtccatgcggtctatggcaccggcgaagggccgcgcgcggccttcggccttgcc
tatgcctggcacgacgtcgatacgaaccgctcgatcggcttcgcgccgcttgcccagtcg
ctgacctcgcagcgcgacgccgacacgctgcagctcttcaccgagcttggctatgacgtc
gcgaccggcgatgtggcggtgacgccctttgcgcggctcgcgctggtgcgcaccgaaagc
gaccccttcgtcgaaacaggcggcagcgccgcgctcgcggtcgccaaggcgaccgaggag
acgacactgctgagcctcggcgtgcgggcgcagggcgatggcggcgacacgggcttcaag
ccctatgtctcggcggcgtggaaccgcgccttcgacgatcgcggcgcgcgcgtccgggcg
ggctttgcgagcggcggcgcgccgttcacgatcaccggcacgctgatccccaagagctcg
gccgagctcgaggcgggcttcgattataccaccggcgcctttaccatcggcgcgggctat
atggcgacgctcggttcggaccgcgacactcagggggccaggataaccgcccgattcgcc
ttctga
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