Sphingopyxis indica: KNJ79_01505
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Entry
KNJ79_01505 CDS
T09492
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sina
Sphingopyxis indica
Pathway
sina03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KNJ79_01505 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sina03400
]
KNJ79_01505 (ung)
Enzymes [BR:
sina01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KNJ79_01505 (ung)
DNA repair and recombination proteins [BR:
sina03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KNJ79_01505 (ung)
Prokaryotic type
KNJ79_01505 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WOF43670
LinkDB
All DBs
Position
321961..322674
Genome browser
AA seq
237 aa
AA seq
DB search
MAEVKLHPDWLAAIGGEFEQPYMADLKAFLAAERAKGKRIYPRPRDWFAALDATPPQEVR
VVILGQDPYHGPGQAHGLCFSVQPGVRTPPSLVNIYKEMQTDLGIPPARHGYLKSWADQG
VLLLNNCLTVEAGMAASHQKRGWERFTDAAVAAVAADPAPKVFILWGSHAQRKAANVPAL
GPGTPHLILRAPHPSPLSAHNGFFGSRPFSQANDFLTANGRGAIDWRLPETPETAAT
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggtcaagctccatcccgactggctcgccgcgatcggcggcgagttcgaacag
ccctatatggccgatctgaaggcgttcctcgcggccgagcgcgcgaagggcaagcgcatc
tatccgcgcccgcgcgactggttcgcggcgctcgacgcgacgccgccgcaggaggtgcgc
gtcgtgattctggggcaggacccctatcatggccccgggcaggcgcacgggctgtgcttt
tcggtccagccaggcgtgcgcacccctccgagcctcgtcaacatctacaaggaaatgcag
accgacctgggcattccgccggcgcgccacggctatctgaagagctgggccgaccagggc
gtgctgctcctcaacaattgcctgaccgtcgaggcggggatggccgcgtcgcaccagaaa
aggggctgggagcgcttcaccgacgccgcggtcgcggcggtcgccgccgatccggcgccc
aaggtcttcatcctgtggggcagccatgcccagcgcaaggcggcgaatgtccccgcgctc
ggacccggaaccccgcacctgatcctgcgcgcgccgcacccctcgccgctgtcggcgcat
aatggatttttcggctcgcggccgttcagccaggccaatgatttcctgaccgcgaacgga
cgcggtgcgatcgactggcggctccccgagactcccgagaccgccgctacatga
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