Sphingopyxis indica: KNJ79_04305
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Entry
KNJ79_04305 CDS
T09492
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sina
Sphingopyxis indica
Pathway
sina00300
Lysine biosynthesis
sina00470
D-Amino acid metabolism
sina01100
Metabolic pathways
sina01110
Biosynthesis of secondary metabolites
sina01120
Microbial metabolism in diverse environments
sina01230
Biosynthesis of amino acids
Module
sina_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KNJ79_04305 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KNJ79_04305 (lysA)
Enzymes [BR:
sina01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KNJ79_04305 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Collagen_mid
Motif
Other DBs
NCBI-ProteinID:
WOF44163
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Position
935720..936979
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AA seq
419 aa
AA seq
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MDHFQYRDGVLHAEDIPLPRIAEEIGTPVYVYSRATLERHAQVFRDALKDVPKKHIAFAI
KCNPNLGVLRVLARQGYGADVVSGGELERALAAGMAAEDIVFSGVGKTRAELAQGLDRGI
GQFNIEHEPEGVALAEIAAAKETTAQAVLRVNPDVDAGTHAKISTGKAENKFGVGIDVAP
AIFDRLAGLPGLKMRGVALHIGSQLTSLAPLEAAFERVGRLIADLRAAGHSITHVDLGGG
LGVPYRPEDNPPTPADYGAMVARVTKDWDVTLMFEPGRVIAGNTGVLLTEVLWVKPGASH
PFVIVDAAMNDLARPALYDAWHDFVAVEPNGEKMTASIVGPVCETGDTFARDRVIDAVKS
GDLAAFRTAGAYGATMASTYNSRSLVPEVLVDGDRYITVADRIAAGTIMAAERVPDWIE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttcaataccgcgacggcgtcctccacgccgaggatattccgctgccccgt
atcgccgaagagatcggcacccccgtctatgtctattcgcgcgcgacgctcgaacgccat
gcgcaggtgttccgcgacgcgctgaaggatgtgccgaagaagcacatcgcctttgcgatc
aagtgcaaccccaacctcggcgtgctgcgcgtgctcgcgcggcagggctatggcgccgac
gtcgtctcgggcggcgagctcgaacgcgcgctcgccgcgggcatggcggccgaggacatc
gtcttttcgggcgtcggcaagacgcgcgccgagctggcgcaggggctcgaccgcggcatc
ggccagttcaatatcgagcatgagcccgaaggcgtcgcgcttgcggagatcgccgcggcg
aaggagacgaccgcgcaggcggtgctgcgcgtcaaccccgacgtcgatgccggcacccat
gcgaaaatctcgacgggcaaggccgagaacaagttcggcgtcggcatcgacgtcgcgccc
gcgatcttcgaccggctcgcagggcttccgggattgaagatgcgcggggtcgcgctccac
atcggcagccagctcaccagcctcgcgccgctcgaagccgcgttcgagcgcgtcggccgc
ctgatcgccgatctgcgcgccgcggggcacagcatcacccacgtcgaccttggcggcggc
ctcggcgtgccctatcggcccgaggacaatccgccgacccccgccgattatggcgcgatg
gtcgcgcgcgtgacgaaggactgggacgtcacgctgatgttcgaacccggccgcgtgatc
gcgggcaataccggcgtgctgctcaccgaagtgctgtgggtcaagcccggcgcgagccac
cccttcgtgatcgtcgatgcggcgatgaacgacctcgcgcgccccgcgctctacgatgcc
tggcacgatttcgttgcggtcgaaccgaacggcgagaaaatgaccgcctcgatcgtcggc
ccggtgtgcgagaccggcgacaccttcgcgcgcgaccgggtgatcgacgcggtgaaatcg
ggcgacctcgccgccttccgcaccgcgggcgcctatggcgcgaccatggcctcgacctac
aacagccgcagcctggtgcccgaggtgctcgtcgacggcgaccgctatatcaccgtcgcc
gaccgcatcgccgcgggcacgatcatggccgccgaacgcgtgcccgactggattgaatag
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