Sphingopyxis indica: KNJ79_06030
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Entry
KNJ79_06030 CDS
T09492
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sina
Sphingopyxis indica
Pathway
sina00470
D-Amino acid metabolism
sina00550
Peptidoglycan biosynthesis
sina01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KNJ79_06030 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KNJ79_06030 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sina01011
]
KNJ79_06030 (murD)
Enzymes [BR:
sina01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
KNJ79_06030 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sina01011
]
Precursor biosynthesis
Amino acid ligase
KNJ79_06030 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
WOF44484
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Position
1268344..1269648
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AA seq
434 aa
AA seq
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MITSRAFAGRRYAVLGLARSGLATSEALIASGAGVTAWDDREEARDEAMALGADIGDPLT
IDLTGFAGVVVSPGVPLNRHPIAAHAREAHVPVIGDVELFAEARGELPSHKLVGITGTNG
KSTVTALVTHMLESAGIPALMGGNIGLPILARDPLPEGGVYVLELSSYQIDLSHSLACDI
AVLTNITPDHLDRYDGFEGYAASKARLFSLQHRDQVAIVATDDGPSKAIASHINHRLYRV
SAKDIDPADQARWPALQGPHNAQNAVCAIAVCRVLGLNDDEIERGLATYKSLPHRMEWIG
EARGASWYNDSKATNAASAAPALAAFPPAPDQRLHWIAGGQAKGDGLAACRPWFGHVKRA
YLIGEAMEGFAEEIGDALPVDRAGTLEQAVADAAAAVQPGDVVLLSPACASFDQYKDYEE
RGDRFRALVKALGA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaccagccgcgcctttgccggccgccgctatgcggtgctgggactggcgcgctcg
gggctcgcgacctcagaggcgctgatcgccagcggcgccggcgtgaccgcgtgggacgac
cgcgaggaagcgcgcgacgaggcgatggcgctgggtgccgacatcggcgacccgctgacg
atcgacctcaccggctttgccggggtggtcgtttcgcccggcgtgccattgaaccgccac
ccgatcgcggcgcacgcgcgcgaggcgcatgtgccggtgatcggcgacgtcgaacttttc
gccgaagcgcgcggtgagctgccgtcgcacaagctcgtcggcatcaccggcaccaacggc
aagtcgacggtcaccgcgctcgtcacccatatgctcgaaagcgcgggcatccctgcgctg
atgggcggcaacatcggcctgccgatcctcgcgcgcgatcccctgcccgaaggtggcgtc
tatgtgctcgaactgtcgagctatcagatcgacctttcgcacagcctggcgtgcgacatt
gcggtgctcaccaacatcacccccgaccatctcgaccgctatgacggattcgaaggctat
gccgcgtcgaaggcccgcctgttcagccttcagcaccgcgatcaagtggcgatcgtcgcg
accgacgacggcccgtcgaaagcgatcgcgagccacatcaaccatcgcctctatcgcgtc
tcggcgaaagacatcgaccctgccgatcaggcgcgctggcccgcgctgcaggggccgcat
aatgcgcagaacgccgtctgcgcgatcgcggtctgccgggtgctcggcctgaacgacgac
gaaatcgagcgcggccttgcgacctataagtcgctgccgcatcgcatggaatggatcggc
gaagcccgtggcgccagctggtataacgacagcaaggcgaccaacgcggcttccgctgca
ccggcgctggcggcttttccgccggcgccggaccagcgtttgcactggatcgcgggcggg
caggcaaagggcgacgggctcgccgcctgccgtccatggttcggccatgtcaagcgcgcc
tatctgatcggcgaggcgatggagggctttgccgaggagatcggcgacgcacttccggtc
gatcgcgcggggacgctcgaacaggccgtcgccgatgccgccgcggcggtgcagccgggc
gatgtggtgctgctctcgcccgcctgcgcctcgttcgaccagtataaggattatgaagaa
cgcggcgaccggttccgggcgctggtcaaggcgctcggggcgtga
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