Sphingopyxis indica: KNJ79_06860
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Entry
KNJ79_06860 CDS
T09492
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sina
Sphingopyxis indica
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sina03021
]
KNJ79_06860 (rpoH)
Transcription machinery [BR:
sina03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KNJ79_06860 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
WOF44632
LinkDB
All DBs
Position
complement(1472681..1473583)
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AA seq
300 aa
AA seq
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MANKSNVPAVVPALGGEASLNRYLAEIRKFPLLTPEQEYMLAKRFQEHGDNEAAAQLVTS
HLRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFDPERGFRLATYAMWWIRASIQEF
ILRSWSLVKMGTTAAQKKLFFNLRRMKNNLEAFEDGDLSPENVAKIAKDLGVTEDEVVSM
NRRMAMGGDTSLNVPMGEDGDSQWQDLLGDEEPLQDERVAEAEERDVRHDLLGEALETLN
ERERHILTERRLTDDPKTLEDLSQVYDVSRERVRQIEVRAFEKLQKAMLKLAGERRLIGA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaaagcaatgtcccggccgtagtgcctgcactgggcggcgaagccagtctg
aaccgctatctggccgaaatccgtaaatttccgctccttacccccgagcaggaatatatg
ctcgccaagcgctttcaggagcatggcgacaatgaggcggcggcgcagctcgtcacctcg
cacctgcgcctcgtcgcgaagatcgcgatgggctatcgcggctatggcctgccggtcagc
gagctgatttcggaaggcaatatcgggctgatgcagggggtgaagaaattcgaccccgaa
cgcggcttccgcctcgccacctatgcgatgtggtggattcgcgcgtcgattcaggagttc
atcctgcgctcgtggagcctcgtgaagatgggcaccaccgcggcgcagaagaagctgttc
ttcaacctccgccggatgaaaaacaacctcgaagcgttcgaggatggcgaccttagcccc
gagaatgtcgcaaagatcgccaaggaccttggcgtcaccgaggatgaggtggtcagcatg
aatcgccgcatggcgatgggcggcgacacgtcgctcaacgtgccgatgggcgaggatggc
gacagccagtggcaggatctgctcggcgacgaagagccgttgcaggacgaacgcgtcgcc
gaagccgaagagcgcgacgtgcggcacgacctgctgggcgaagcgctcgaaacgctcaat
gaacgcgagcgccatatcctgaccgaacgccgcctgaccgacgatccgaaaacgctcgag
gatctgagccaggtctatgacgtcagccgcgagcgcgtccgccagatcgaggtgcgggca
ttcgagaagctgcaaaaggcgatgctcaagctcgccggcgagcgccgcctgatcggcgct
tga
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